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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2b9lA_ | PDB header: immune system/protein binding | Chain: A: PDB Molecule: prophenoloxidase activating factor; | PDBTitle: crystal structure of prophenoloxidase activating factor-ii2 from the beetle holotrichia diomphalia |
Added to library: Tue Mar 16 13:00:25 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | G | H | M | A | V | V | N | I | F | G | N | A | S | E | Y | I | P | P | G | Y | E | A | P | L | G | A | L | T | A | L | P | R | C | G | T | G | A | D | Q | G | K | K | V | C | I | V | Y | H | R | C | D | G | V | T | N | T | V | T | P | E | E | V | I | N | T | T | G | E | G | I |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | S | B | T | T | G | G | G | S | ![]() | ![]() | G | G | G | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | B | T | T | T | B | B | S | S | S | S | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | F | D | I | R | E | N | A | N | E | C | E | S | Y | L | D | V | C | C | G | L | P | P | V | V | P | V | L | K | P | S | F | C | G | I | R | N | E | R | G | L | D | F | K | I | T | G | Q | T | N | E | A | E | Y | G | E | F | P | W | M | V | A | V | L | K | A | N | E | E | Q | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | T | T | S | S | S | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | B | T | T | B | T | T | S | S | ![]() | ![]() | ![]() | S | S | S | B | T | T | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | V | C | G | G | S | L | I | A | P | S | V | V | L | T | G | A | H | C | V | N | S | Y | Q | S | N | L | D | A | I | K | I | R | A | G | E | W | D | T | L | T | E | K | E | R | L | P | Y | Q | E | R | K | I | R | Q | V | I | I | H | S | N | F | N | P | K | T | V | V | N | D | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | T | T | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | T | T | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | T | T |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | A | L | L | L | L | D | R | P | L | V | Q | A | D | N | I | G | T | I | C | L | P | Q | Q | S | Q | I | F | D | S | T | E | C | F | A | S | G | W | G | K | K | E | F | G | S | R | H | R | Y | S | N | I | L | K | K | I | Q | L | P | T | V | D | R | D | K | C | Q | A | D | L | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | B | T | T | B | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | T | T | S | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 |
Sequence | N | T | R | L | G | L | K | F | V | L | D | Q | T | F | V | C | A | G | G | E | Q | G | K | D | T | C | T | G | D | G | G | S | P | L | F | C | P | D | P | R | N | P | S | R | Y | M | Q | M | G | I | V | A | W | G | I | G | C | G | D | E | N | V | P | G | V | Y | A | N | V | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | B | S | S | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | B | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | G | G |   | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . |
Sequence | H | F | R | N | W | I | D | Q | E | M | Q | A | K | G | L | S | T | T | P | Y | V | E | ||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | G | G | G | T |
Download: | PDB structure | FASTA sequence |
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