PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2azjB_

Fold library id	PDB Header	Molecule	Title
c2azjB_	PDB header: transferase	Chain: B: PDB Molecule: geranylgeranyl pyrophosphate synthetase;	PDBTitle: crystal structure for the mutant d81c of sulfolobus2 solfataricus hexaprenyl pyrophosphate synthase

Links to external resources
Added to library: Tue Mar 16 13:42:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I I E F W L E A K A T I D R L I E Q F L N S N R D W D L V D I S S Y I L K D G K R F R G T L N M F F T V A L G G D I K D S Y G G A L A I E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T G G G G G G T T S
T T T
S G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L H S A S L A L C D I V D L D A T R R G D K A A W V V Y G N R K V I F I T N Y L I P T A L R I I Q T S Y G D D A L N T S I E L W K D T S V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A L R D M Y D N S D Y I R T I E L K T G S L F K L S T V L S A Y A S K H Y N T K Q Q M L D V G K Y L G I I Y Q V I D D F V D Y K T K K V E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T
G G G T T T S S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . .

Sequence I D G S A K Q L F K Y Y R E G K L E E Y V R S V Y L E Y K Q K Y D E L I S N I P F Q S K Y L S E I R S L P E F L A N G L L K E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T S S
S T T S S G G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	I	E	F	W	L	E	A	K	A	T	I	D	R	L	I	E	Q	F	L	N	S	N	R	D	W	D	L	V	D	I	S	S	Y	I	L	K	D	G	K	R	F	R	G	T	L	N	M	F	F	T	V	A	L	G	G	D	I	K	D	S	Y	G	G	A	L	A	I	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																		T	T	G	G	G	G	G	G	T						T	S																T	T	T			S	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	H	S	A	S	L	A	L	C	D	I	V	D	L	D	A	T	R	R	G	D	K	A	A	W	V	V	Y	G	N	R	K	V	I	F	I	T	N	Y	L	I	P	T	A	L	R	I	I	Q	T	S	Y	G	D	D	A	L	N	T	S	I	E	L	W	K	D	T	S	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S		S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	L	R	D	M	Y	D	N	S	D	Y	I	R	T	I	E	L	K	T	G	S	L	F	K	L	S	T	V	L	S	A	Y	A	S	K	H	Y	N	T	K	Q	Q	M	L	D	V	G	K	Y	L	G	I	I	Y	Q	V	I	D	D	F	V	D	Y	K	T	K	K	V	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S												T															T	T		G	G	G																							T	T	T	S	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Sequence	I	D	G	S	A	K	Q	L	F	K	Y	Y	R	E	G	K	L	E	E	Y	V	R	S	V	Y	L	E	Y	K	Q	K	Y	D	E	L	I	S	N	I	P	F	Q	S	K	Y	L	S	E	I	R	S	L	P	E	F	L	A	N	G	L	L	K	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					T					T	T	S																								S				S	T	T	S	S	G	G	G	G