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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1zvdA_

Fold library idPDB HeaderMoleculeTitle
c1zvdA_PDB header: ligaseChain: A: PDB Molecule: smad ubiquitination regulatory factor 2;PDBTitle: regulation of smurf2 ubiquitin ligase activity by anchoring2 the e2 to the hect domain


Added to library: Tue Mar 16 13:56:41 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVXKXRPKDLWKRLXIKFRGEEGLDYGGVA
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Known secondary structure (DSSP)

SS
SS

STTTS
GGGGGSTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence REWLYLLSHEXLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIXGXAVFHGHYIDGGFTLPF
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Known secondary structure (DSSP) TSGGGSSTT
TTGGGSTTTT







 .........150.........160.........170.........180.........190.........200.........210
Sequence YKQLLGKSITLDDXELVDPDLHNSLVWILENDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVNEENK
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Known secondary structure (DSSP) TT



STT
S

TTTS


STTSSTT





TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKVNTRLKHCTP
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Known secondary structure (DSSP) TTTTS
GGGGTT


BSS

TSS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence DSNIVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFN
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Known secondary structure (DSSP) TSS
S
SSB
TT
GGG
TT





TTS

GGGT
 .........360.........370...
Sequence RIDIPPYESYEKLYEKLLTAIEE
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Known secondary structure (DSSP)


SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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