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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1zreB_

Fold library idPDB HeaderMoleculeTitle
c1zreB_PDB header: gene regulation/dnaChain: B: PDB Molecule: catabolite gene activator;PDBTitle: 4 crystal structures of cap-dna with all base-pair2 substitutions at position 6, cap-[6g;17c]icap38 dna


Added to library: Tue Mar 16 12:57:36 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence DPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE
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Known secondary structure (DSSP)

TTS


TT

TTSB

S
TT

TT
S
TTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTL
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Known secondary structure (DSSP) TT
B

SSS

T

 .........150.........160.........170.........180.........190.........200
Sequence LNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYG
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Known secondary structure (DSSP) TTSTT
TT

TS
TTTSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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