PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1znnF_

Fold library id	PDB Header	Molecule	Title
c1znnF_	PDB header: biosynthetic protein	Chain: F: PDB Molecule: plp synthase;	PDBTitle: structure of the synthase subunit of plp synthase

Links to external resources
Added to library: Tue Mar 16 13:57:32 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K G G V I M D V V N A E Q A K I A E A A G A V A V M A L E G G V A R M A D P T V I E E V M N A V S I P V M A K V R I G H Y V E A R V L E A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
S
S
S S
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G V D Y I D E S E V L T P A D E E F H I D K R Q F T V P F V C G C R D L G E A A R R I A E G A S M L R T K G E P G T G N I V E A V R H M R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T T S
S
S S
G G G
S S
S S T T
S
T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V N A Q I R K V V N M S E D E L V A E A K Q L G A P V E V L R E I K R L G R L P V V N F A A G G V T T P A D A A L M M H L G A D G V F V G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G T
T S
S S
S S
S T T
S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . .

Sequence G I F K S E N P E K Y A R A I V E A T T H Y E D Y E L I A H L S K G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S T T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	G	G	V	I	M	D	V	V	N	A	E	Q	A	K	I	A	E	A	A	G	A	V	A	V	M	A	L	E	G	G	V	A	R	M	A	D	P	T	V	I	E	E	V	M	N	A	V	S	I	P	V	M	A	K	V	R	I	G	H	Y	V	E	A	R	V	L	E	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S										T	T		S												S														S	S								T	T											T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	V	D	Y	I	D	E	S	E	V	L	T	P	A	D	E	E	F	H	I	D	K	R	Q	F	T	V	P	F	V	C	G	C	R	D	L	G	E	A	A	R	R	I	A	E	G	A	S	M	L	R	T	K	G	E	P	G	T	G	N	I	V	E	A	V	R	H	M	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S						T	T	S			S		S	S					G	G	G		S	S							S	S										T	T		S								T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	N	A	Q	I	R	K	V	V	N	M	S	E	D	E	L	V	A	E	A	K	Q	L	G	A	P	V	E	V	L	R	E	I	K	R	L	G	R	L	P	V	V	N	F	A	A	G	G	V	T	T	P	A	D	A	A	L	M	M	H	L	G	A	D	G	V	F	V	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		G	G	G									T													T	S		S	S						S	S			S										T	T		S						T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Sequence	G	I	F	K	S	E	N	P	E	K	Y	A	R	A	I	V	E	A	T	T	H	Y	E	D	Y	E	L	I	A	H	L	S	K	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S														T	T	T										T	T