PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1zkpD_

Fold library id	PDB Header	Molecule	Title
c1zkpD_	PDB header: structural genomics, unknown function	Chain: D: PDB Molecule: hypothetical protein ba1088;	PDBTitle: 1.5a resolution crystal structure of a metallo beta2 lactamase family protein, the elac homolgue of bacillus3 anthracis, a putative ribonuclease

Links to external resources
Added to library: Tue Mar 16 14:09:06 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L Y F Q S N A X K X T V V G F W G G F P E A G E A T S G Y L F E H D G F R L L V D C G S G V L A Q L Q K Y I T P S D I D A V V L S H Y H H D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
B S S S
T T
B S T T
T T T T T S
G G G
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H V A D I G V L Q Y A R L I T S A T K G Q L P E L P I Y G H T F D E N G F H S L T H E P H T K G I P Y N P E E T L Q I G P F S I S F L K T V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S S T T
B T T T
T T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H P V T C F A X R I T A G N D I V V Y S A D S S Y I P E F I P F T K D A D L F I C E C N X Y A H Q E A A K A G H X N S T E V A S I A K D A N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T
S
T T T T
S
B
T T S
G G G T
B T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 .

Sequence V K E L L L T H L P H T G N P A D L V T E A K Q I F S G H I T L A H S G Y V W N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S B
S S S
T T T
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	Y	F	Q	S	N	A	X	K	X	T	V	V	G	F	W	G	G	F	P	E	A	G	E	A	T	S	G	Y	L	F	E	H	D	G	F	R	L	L	V	D	C	G	S	G	V	L	A	Q	L	Q	K	Y	I	T	P	S	D	I	D	A	V	V	L	S	H	Y	H	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S			S									B	S	S	S			T	T			B	S							T	T									T	T						T	T	T	S		G	G	G							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	V	A	D	I	G	V	L	Q	Y	A	R	L	I	T	S	A	T	K	G	Q	L	P	E	L	P	I	Y	G	H	T	F	D	E	N	G	F	H	S	L	T	H	E	P	H	T	K	G	I	P	Y	N	P	E	E	T	L	Q	I	G	P	F	S	I	S	F	L	K	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T															T												S	S	S						T	T		B	T	T	T								T	T	S					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	P	V	T	C	F	A	X	R	I	T	A	G	N	D	I	V	V	Y	S	A	D	S	S	Y	I	P	E	F	I	P	F	T	K	D	A	D	L	F	I	C	E	C	N	X	Y	A	H	Q	E	A	A	K	A	G	H	X	N	S	T	E	V	A	S	I	A	K	D	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S										T	T								S					T	T						T	T		S								B		T	T	S			G	G	G	T			B											T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Sequence	V	K	E	L	L	L	T	H	L	P	H	T	G	N	P	A	D	L	V	T	E	A	K	Q	I	F	S	G	H	I	T	L	A	H	S	G	Y	V	W	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S						S	B		S	S	S		T									T	T			S							T	T