PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1zkgB_

Fold library id	PDB Header	Molecule	Title
c1zkgB_	PDB header: transcription regulator	Chain: B: PDB Molecule: transcriptional regulator, tetr family;	PDBTitle: crystal structure of transcriptional regulator, tetr family2 (tm1030) from thermotoga maritima at 2.30 a resolution

Links to external resources
Added to library: Tue Mar 16 12:02:33 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L S K R D A I L K A A V E V F G K K G Y D R A T T D E I A E K A G V A K G L I F H Y F K N K E E L Y Y Q A Y X S V T E K L Q K E F E N F L X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K N R N R D I F D F X E R W I E K K L E Y S A S H P E E A D F L I T L V S V D E G L R K R I L L D L E K S Q R V F F D F V R E K L K D L D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
G G G T T S
T T S
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . .

Sequence A E D V T E E I A L K F L X W F F S G F E E V Y L R T Y Q G K P E L L K R D X N T L V E E V K V X L R I L K K G X T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	S	K	R	D	A	I	L	K	A	A	V	E	V	F	G	K	K	G	Y	D	R	A	T	T	D	E	I	A	E	K	A	G	V	A	K	G	L	I	F	H	Y	F	K	N	K	E	E	L	Y	Y	Q	A	Y	X	S	V	T	E	K	L	Q	K	E	F	E	N	F	L	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																	T	S									S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	N	R	N	R	D	I	F	D	F	X	E	R	W	I	E	K	K	L	E	Y	S	A	S	H	P	E	E	A	D	F	L	I	T	L	V	S	V	D	E	G	L	R	K	R	I	L	L	D	L	E	K	S	Q	R	V	F	F	D	F	V	R	E	K	L	K	D	L	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S																												G	G	G	T	T	S																												T	T	S		B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Sequence	A	E	D	V	T	E	E	I	A	L	K	F	L	X	W	F	F	S	G	F	E	E	V	Y	L	R	T	Y	Q	G	K	P	E	L	L	K	R	D	X	N	T	L	V	E	E	V	K	V	X	L	R	I	L	K	K	G	X	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																										T	T																												B