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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1zbhA_

Fold library idPDB HeaderMoleculeTitle
c1zbhA_PDB header: hydrolase/rnaChain: A: PDB Molecule: 3'-5' exonuclease eri1;PDBTitle: 3'-end specific recognition of histone mrna stem-loop by 3'-2 exonuclease


Added to library: Tue Mar 16 13:39:32 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DFSDPVYKEIAITNGCINRMSKEELRAKLSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESNFADSYYDY
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Known secondary structure (DSSP)


SS

TT



S


S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDR
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Known secondary structure (DSSP)




TT

TT



TTT

B

SSS
S




T
 .........150.........160.........170.........180.........190.........200.........210
Sequence ADTFPQVLKKVIDLMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYK
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Known secondary structure (DSSP) SB
TTBTTTB
SSSTTTB


GGGST
 .........220.........230.........240.........250.........260.........270.........280
Sequence VPRSQTKLTIMLEKLGMDYDGRPNCGLDDSKNIARIAVRMLQDGCELRINEKMHAGQLMSVSSSLPIEGT
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Known secondary structure (DSSP)

GGG
STT



S
TT
TT





TT

SSS




 .........
Sequence PPPQMPHFR
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SS confidence








Known secondary structure (DSSP)






B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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