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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1z8yF_ | PDB header: virus | Chain: F: PDB Molecule: spike glycoprotein e1; | PDBTitle: mapping the e2 glycoprotein of alphaviruses |
Added to library: Tue Mar 16 11:58:18 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | L | V | S | T | V | K | C | E | V | S | E | C | T | Y | S | A | D | F | G | G | M | A | T | L | Q | Y | V | S | D | R | E | G | Q | C | P | V | H | S | H | S | S | T | A | T | L | Q | E | S | T | V | H | V | L | E | K | G | A | V | T | V | H | F | S | T | A | S | P | Q | A | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | B | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | B | S | S | S | S | S | ![]() | ![]() | ![]() | T | T | S | S | B | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | ||||||||||||
Sequence | F | I | V | S | L | C | G | K | K | T | T | C | N | A | E | C | K | P | P | |||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | B | T | T | B | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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