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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1z6tC_

Fold library idPDB HeaderMoleculeTitle
c1z6tC_PDB header: apoptosisChain: C: PDB Molecule: apoptotic protease activating factor 1;PDBTitle: structure of the apoptotic protease-activating factor 12 bound to adp


Added to library: Tue Mar 16 12:03:42 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVS
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Known secondary structure (DSSP)




TS

TSSSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FYNALLHEGYKDLAALLHDGIPVVSSSSGKDSVSGITSYVRTVLCEGGVPQRPVVFVTRKKLVNAIQQKL
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Known secondary structure (DSSP) TT
GGG

GGGSS



TT




SS



 .........150.........160.........170.........180.........190.........200.........210
Sequence SKLKGEPGWVTIHGMAGCGKSVLAAEAVRDHSLLEGCFPGGVHWVSVGKQDKSGLLMKLQNLCTRLDQDE
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Known secondary structure (DSSP) TTSTTS


TTSS


TT
S

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SFSQRLPLNIEEAKDRLRILMLRKHPRSLLILDDVWDSWVLKAFDSQCQILLTTRDKSVTDSVMGPKYVV
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Known secondary structure (DSSP)
S
SS


ST
TT


TT
SS
S
GGGGTT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence PVESSLGKEKGLEILSLFVNMKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLKQLQNKQF
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Known secondary structure (DSSP)

SS

TS
GGGS
TTT
STT
S


 .........360.........370.........380.........390.........400.........410.........420
Sequence KRIRKSSSYDYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVN
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Known secondary structure (DSSP)

SS

SS


TS
GGG

TT

T

 .........430.........440.........450.........460.........470.........480.........490
Sequence KSLLFCDRNGKSFRYYLHDLQVDFLTEKNCSQLQDLHKKIITQFQRYHQPHTLSPDQEDCMYWYNFLAYH
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Known secondary structure (DSSP) TTSSTT

TGGGTTT

GGG

TTSTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence MASAKMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAVSENFQEFLSLNGHLLGRQPF
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Known secondary structure (DSSP) TT
S

SGGGS
TTTTTT
SS
 .........570.........580......
Sequence PNIVQLGLCEPETSEVYQQAKLQAKQ
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Known secondary structure (DSSP)

TTS
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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