Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1z6fA_

Fold library idPDB HeaderMoleculeTitle
c1z6fA_PDB header: hydrolaseChain: A: PDB Molecule: penicillin-binding protein 5;PDBTitle: crystal structure of penicillin-binding protein 5 from e.2 coli in complex with a boronic acid inhibitor


Added to library: Tue Mar 16 13:15:57 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)

SS







STTT

STT

B

GGGTTS

TT


G
 .........80.........90.........100.........110.........120.........130.........140
Sequence DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLK
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) GG
GGG
GGGTTS





TT
TT

SSTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIK
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) S
B

SSS



TT
BB

GGGG

TT
S
GGGG
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFG
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) TTTTT

STTTT
TTS
S
BSB
 .........290.........300.........310.........320.........330.........340.........350
Sequence DSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIP
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) SSS
SS
TT
GGG
SSSS
BS
B
TT
TTSS
B
 ....
Sequence EGNF
Predicted secondary structure



SS confidence



Known secondary structure (DSSP) B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D