PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1z47B_

Fold library id	PDB Header	Molecule	Title
c1z47B_	PDB header: ligand binding protein	Chain: B: PDB Molecule: putative abc-transporter atp-binding protein;	PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius

Links to external resources
Added to library: Tue Mar 16 13:16:46 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T I E F V G V E K I Y P G G A R S V R G V S F Q I R E G E M V G L L G P S G S G K T T I L R L I A G L E R P T K G D V W I G G K R V T D L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T
T T
S T T S S T S S
S T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P Q K R N V G L V F Q N Y A L F Q H M T V Y D N V S F G L R E K R V P K D E M D A R V R E L L R F M R L E S Y A N R F P H E L S G G Q Q Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S S T T
T T S
T T G G G T T
T T
G G G T T S
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V A L A R A L A P R P Q V L L F D E P F A A I D T Q I R R E L R T F V R Q V H D E M G V T S V F V T H D Q E E A L E V A D R V L V L H E G N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S T T T T S
S
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V E Q F G T P E E V Y E K P G T L F V A S F I G E S N V W T R A V Q N G R I E V A G A A L P V D P A V S E G S E V A V V V R P K D V E L Q P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S S
B T T S S S
T T S
T T
G G G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . .

Sequence A S E R E A H A Q V V R S A F K G S Y S A C W I R T K D G E V W E V H V P S A D R H R W S P G A W V H M N V T R W F I F P R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
S S T T S
G G G T T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	I	E	F	V	G	V	E	K	I	Y	P	G	G	A	R	S	V	R	G	V	S	F	Q	I	R	E	G	E	M	V	G	L	L	G	P	S	G	S	G	K	T	T	I	L	R	L	I	A	G	L	E	R	P	T	K	G	D	V	W	I	G	G	K	R	V	T	D	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S	T	T											T	T								S	T	T	S	S										T	S	S			S							T	T				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	Q	K	R	N	V	G	L	V	F	Q	N	Y	A	L	F	Q	H	M	T	V	Y	D	N	V	S	F	G	L	R	E	K	R	V	P	K	D	E	M	D	A	R	V	R	E	L	L	R	F	M	R	L	E	S	Y	A	N	R	F	P	H	E	L	S	G	G	Q	Q	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S	S						T	T					T	T	S								T	T	G	G	G	T	T																	T	T		G	G	G	T	T	S		G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	A	L	A	R	A	L	A	P	R	P	Q	V	L	L	F	D	E	P	F	A	A	I	D	T	Q	I	R	R	E	L	R	T	F	V	R	Q	V	H	D	E	M	G	V	T	S	V	F	V	T	H	D	Q	E	E	A	L	E	V	A	D	R	V	L	V	L	H	E	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			S						S	T	T	T	T	S																												S										S							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	E	Q	F	G	T	P	E	E	V	Y	E	K	P	G	T	L	F	V	A	S	F	I	G	E	S	N	V	W	T	R	A	V	Q	N	G	R	I	E	V	A	G	A	A	L	P	V	D	P	A	V	S	E	G	S	E	V	A	V	V	V	R	P	K	D	V	E	L	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S		S	S							S	S										B	T	T				S	S	S							T	T	S		T	T									G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Sequence	A	S	E	R	E	A	H	A	Q	V	V	R	S	A	F	K	G	S	Y	S	A	C	W	I	R	T	K	D	G	E	V	W	E	V	H	V	P	S	A	D	R	H	R	W	S	P	G	A	W	V	H	M	N	V	T	R	W	F	I	F	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T		S										S	S									T	T	S									G	G	G	T	T	T			T	T