PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1z2iA_

Fold library id	PDB Header	Molecule	Title
c1z2iA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: malate dehydrogenase;	PDBTitle: crystal structure of agrobacterium tumefaciens malate2 dehydrogenase, new york structural genomics consortium

Links to external resources
Added to library: Tue Mar 16 13:55:23 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T V L A R L D E L E R F C R A V F L A V G T D E E T A D A A T R A M M H G T R L G V D S H G V R L L A H Y V T A L E G G R L N R R P Q I S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
G G G S G G G T S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V S G F G A V E T I D A D H A H G A R A T Y A A M E N A M A L A E K F G I G A V A I R N S S H F G P A G A Y A L E A A R Q G Y I G L A F C N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
S
S
T T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S D S F V R L H D G A M R F H G T N P I A V G V P A A D D M P W L L D M A T S A V P Y N R V L L Y R S L G Q Q L P Q G V A S D G D G V D T R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
T T
S S
B
S S S
S B S S
T T
T T S
T T S
B
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D P N A V E M L A P V G G E F G F K G A A L A G V V E I F S A V L T G M R L S F D L A P M G G P D F S T P R G L G A F V L A L K P E A F L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
B T T G G G T T T T S
G G G S
S S S S
S S
G G G T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence R D V F D E S M K R Y L E V L R G S P A R E D C K V M A P G D R E W A V A A K R E R E G A P V D P V T R A A F S E L A E K F S V S P P T Y H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T
T T T
T
B

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	V	L	A	R	L	D	E	L	E	R	F	C	R	A	V	F	L	A	V	G	T	D	E	E	T	A	D	A	A	T	R	A	M	M	H	G	T	R	L	G	V	D	S	H	G	V	R	L	L	A	H	Y	V	T	A	L	E	G	G	R	L	N	R	R	P	Q	I	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T																			T	T		G	G	G	S	G	G	G											T	S	S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	S	G	F	G	A	V	E	T	I	D	A	D	H	A	H	G	A	R	A	T	Y	A	A	M	E	N	A	M	A	L	A	E	K	F	G	I	G	A	V	A	I	R	N	S	S	H	F	G	P	A	G	A	Y	A	L	E	A	A	R	Q	G	Y	I	G	L	A	F	C	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T							S	S																						S													S		T										T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	D	S	F	V	R	L	H	D	G	A	M	R	F	H	G	T	N	P	I	A	V	G	V	P	A	A	D	D	M	P	W	L	L	D	M	A	T	S	A	V	P	Y	N	R	V	L	L	Y	R	S	L	G	Q	Q	L	P	Q	G	V	A	S	D	G	D	G	V	D	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			B			T	T		S	S			B												S	S	S									S	B	S	S		T										T					T	T	S				T	T	S		B		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	P	N	A	V	E	M	L	A	P	V	G	G	E	F	G	F	K	G	A	A	L	A	G	V	V	E	I	F	S	A	V	L	T	G	M	R	L	S	F	D	L	A	P	M	G	G	P	D	F	S	T	P	R	G	L	G	A	F	V	L	A	L	K	P	E	A	F	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T						B	T	T	G	G	G																T	T	T	T	S				G	G	G	S			S	S	S	S			S	S													G	G	G	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	D	V	F	D	E	S	M	K	R	Y	L	E	V	L	R	G	S	P	A	R	E	D	C	K	V	M	A	P	G	D	R	E	W	A	V	A	A	K	R	E	R	E	G	A	P	V	D	P	V	T	R	A	A	F	S	E	L	A	E	K	F	S	V	S	P	P	T	Y	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S			S	T	T						T	T													T																				T						B