PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1yz7A_

Fold library id	PDB Header	Molecule	Title
c1yz7A_	PDB header: translation	Chain: A: PDB Molecule: probable translation initiation factor 2 alpha	PDBTitle: crystal structure of a c-terminal segment of the alpha2 subunit of aif2 from pyrococcus abyssi

Links to external resources
Added to library: Tue Mar 16 12:51:36 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K A K L Q E F K R A Q K A E N L L K L A A E K L G K D F E T A W R E V W V P L E E E W G E V Y A A F E D A A K D G I D V L K G H V P D E W L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T S S
G G G S B T T B
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P V L K E I I D N Y V E V P T V T I D A E F E I T V P K P N G V E I I K E A L I R A R D R A N K E K D V E V K F T Y L G A P R Y R I D I T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T T S T T
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . .

Sequence P D Y Y K A E E V L E S I A E E I L R V I K E A G G E A T L L R K E K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	A	K	L	Q	E	F	K	R	A	Q	K	A	E	N	L	L	K	L	A	A	E	K	L	G	K	D	F	E	T	A	W	R	E	V	W	V	P	L	E	E	E	W	G	E	V	Y	A	A	F	E	D	A	A	K	D	G	I	D	V	L	K	G	H	V	P	D	E	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T										T									S	S													G	G	G	S	B	T	T	B		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	V	L	K	E	I	I	D	N	Y	V	E	V	P	T	V	T	I	D	A	E	F	E	I	T	V	P	K	P	N	G	V	E	I	I	K	E	A	L	I	R	A	R	D	R	A	N	K	E	K	D	V	E	V	K	F	T	Y	L	G	A	P	R	Y	R	I	D	I	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S																	S	T	T																		T	S	T	T									S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Sequence	P	D	Y	Y	K	A	E	E	V	L	E	S	I	A	E	E	I	L	R	V	I	K	E	A	G	G	E	A	T	L	L	R	K	E	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																						T	T