Fold library entry viewer: c1ym7C_

Added to library: Tue Mar 16 12:40:08 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	K	K	I	L	L	P	E	P	S	I	R	S	V	M	Q	K	Y	L	E	D	R	G	E	V	T	F	E	K	I	F	S	Q	K	L	G	Y	L	L	F	R	D	F	C	L	K	H	L	E	E	A	K	P	L	V	E	F	Y	E	E	I	K	K	Y	E	K	L	E	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S						G	G	G											T	T			S							S														T		T	T																T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	R	L	V	C	S	R	E	I	F	D	T	Y	I	M	K	E	L	L	A	C	S	H	P	F	S	K	S	A	I	E	H	V	Q	G	H	L	V	K	K	Q	V	P	P	D	L	F	Q	P	Y	I	E	E	I	C	Q	N	L	R	G	D	V	F	Q	K	F	I	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T						T	T																	T	T	T				T	T	T	T													T								T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	K	F	T	R	F	C	Q	W	K	N	V	E	L	N	I	H	L	T	M	N	D	F	S	V	H	R	I	I	G	R	G	G	F	G	E	V	Y	G	C	R	K	A	D	T	G	K	M	Y	A	M	K	C	L	D	K	K	R	I	K	M	K	Q	G	E	T	L	A	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T					G	G	G											S	S	S								T	T	T																		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	R	I	M	L	S	L	V	S	T	G	D	C	P	F	I	V	C	M	S	Y	A	F	H	T	P	D	K	L	S	F	I	L	D	L	M	N	G	G	D	L	H	Y	H	L	S	Q	H	G	V	F	S	E	A	D	M	R	F	Y	A	A	E	I	I	L	G	L	E	H	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S			S	S	B										T	T											S		B										S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	H	N	R	F	V	V	Y	R	D	L	K	P	A	N	I	L	L	D	E	H	G	H	V	R	I	S	D	L	G	L	A	C	D	F	S	K	K	K	P	H	A	S	V	G	T	H	G	Y	M	A	P	E	V	L	Q	K	G	V	A	Y	D	S	S	A	D	W	F	S	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								G	G	G					T	T	S								T	T					S	S								S		T	T	S							S	S	S					T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	C	M	L	F	K	L	L	R	G	H	S	P	F	R	Q	H	K	T	K	D	K	H	E	I	D	R	M	T	L	T	M	A	V	E	L	P	D	S	F	S	P	E	L	R	S	L	L	E	G	L	L	Q	R	D	V	N	R	R	L	G	C	L	G	R	G	A	Q	E	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S		S	S		S	S		S	S		T																T	T	S														S	S	S	T	T	S	T	T	T	S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	S	P	F	F	R	S	L	D	W	Q	M	V	F	L	Q	K	Y	P	P	P	L	I	P	P	R	G	K	G	I	K	L	L	D	S	D	Q	E	L	Y	R	N	F	P	L	T	I	S	E	R	W	Q	Q	E	V	A	E	T	V	F	D	T	I	N	A	E	T	D	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	G	G	G	T	T								T	T		S			S																	T	T	S	S	S																	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	A	R	K	K	T	K	N	K	Q	L	G	H	E	E	D	Y	A	L	G	K	D	C	I	M	H	G	Y	M	S	K	M	G	N	T	Q	W	Q	R	R	Y	F	Y	L	F	P	N	R	L	E	W	R	G	E	G	E	A	P	Q	S	L	L	T	M	E	E	I	Q	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	S	S	S	S						S	S	S	S	S																									T	T							T	T	S								S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
Sequence	E	E	T	Q	I	K	E	R	K	C	L	L	L	K	I	R	G	G	K	Q	F	V	L	Q	C	D	S	D	P	E	L	V	Q	W	K	K	E	L	R	D	A	Y	R	E	A	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S								T	T	S						B		S	S

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PDB structure

FASTA sequence

Hidden Markov model

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