Fold library entry viewer: c1yiqA_

Added to library: Tue Mar 16 12:41:07 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	D	I	P	A	N	V	D	G	A	R	I	I	A	A	D	K	E	P	G	N	W	M	S	T	G	R	T	Y	D	E	Q	R	Y	S	P	L	K	Q	I	S	D	Q	N	V	G	Q	L	G	L	A	W	S	Y	K	L	D	L	D	R	G	V	E	A	T	P	I	V	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T									T	G	G	G		T	T		B		S	T	T	S	S	T	T									S	S		T	T	T	G	G	G										S	S		S										T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	V	M	Y	T	T	G	P	F	S	V	V	Y	A	L	D	A	R	D	G	R	L	I	W	K	Y	D	P	Q	S	D	R	H	R	A	G	E	A	C	C	D	A	V	N	R	G	V	A	V	W	K	G	K	V	Y	V	G	V	L	D	G	R	L	E	A	I	D	A	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							G	G	G							T	T	T													G	G	G	G	G	G		T	T		S									T	T							T	T	S							T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	Q	R	A	W	S	V	D	T	R	A	D	H	K	R	S	Y	T	I	T	G	A	P	R	V	V	N	G	K	V	V	I	G	N	G	G	A	E	F	G	V	R	G	Y	V	T	A	Y	D	A	E	T	G	K	E	A	W	R	F	Y	T	V	P	G	D	P	K	L	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		T	T	S			B			S						T	T							B		T	T	T			B								T	T	T									S	S				T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	G	K	G	M	E	I	A	A	K	T	W	F	G	D	A	Y	V	E	Q	G	G	G	G	T	A	W	D	S	F	A	Y	D	P	E	L	N	L	L	Y	I	G	V	G	N	G	S	L	W	D	P	K	W	R	S	Q	A	K	G	D	N	L	F	L	S	S	I	V	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S								T	T			S	S	T												S						T	T	T	T											S	S							T	T		S			T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	A	D	T	G	E	Y	V	W	H	Y	Q	T	T	P	G	D	A	W	D	Y	T	A	T	Q	H	M	I	L	A	E	L	P	I	D	G	K	P	R	K	V	L	M	Q	A	P	K	N	G	F	F	Y	V	I	D	R	A	T	G	E	L	L	S	A	K	G	I	V	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T									S	S	T	T			S						S										T	T											T	T	S							T	T	T									S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	W	T	K	G	M	D	M	K	T	G	R	P	I	L	D	E	E	N	A	A	Y	W	K	N	G	K	R	N	L	V	T	P	A	F	W	G	A	H	D	W	Q	P	M	S	Y	N	P	D	T	G	L	V	Y	I	P	A	H	I	M	S	A	Y	Y	E	H	I	P	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S						T	T	T	T											T	T	T	S	S	S					S	S		T	T		S	S		S	S						T	T	T	T																	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	K	R	N	P	F	K	S	M	Y	Q	L	G	L	R	T	G	M	M	P	E	G	A	E	G	L	L	E	M	A	K	S	W	S	G	K	L	I	A	W	D	P	V	K	Q	Q	A	A	W	E	V	P	Y	V	T	I	F	N	G	G	T	L	S	T	A	G	N	L	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		T	T	S				S	S							S	S									T	T										T	T	T	T									S	S	S									T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	G	S	A	D	G	R	V	I	A	Y	A	A	D	T	G	E	K	L	W	E	Q	P	A	A	S	G	V	M	A	A	P	V	T	Y	S	V	D	G	E	Q	Y	V	T	F	M	A	G	W	G	G	A	F	S	T	F	A	G	A	L	S	L	R	A	G	V	Q	P	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S							T	T	T										S	S				S								T	T												T	T					T					G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	V	L	T	Y	K	L	G	G	T	A	K	L	Q	E	P	A	P	R	P	D	T	P	K	P	P	A	L	S	N	D	T	A	S	I	E	A	G	A	K	L	Y	D	G	Y	C	S	Q	C	H	G	I	H	A	V	S	G	G	V	L	P	D	L	R	K	L	T	P	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T																						S																T						G	G	G				S	S	S			T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Sequence	H	Q	M	F	L	G	I	L	F	G	G	R	V	P	D	G	M	P	S	F	A	D	A	F	T	P	E	Q	V	D	Q	I	H	Q	Y	L	I	K	R	A	H	D	L	H	Q	E	G	D	T	W	K	Q	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T						T	T	T	T	G	G	G	T					T	T	T																								S	S	T	T	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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