Fold library entry viewer: c1yifC_

Added to library: Tue Mar 16 14:23:18 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	I	T	N	P	V	L	K	G	F	N	P	D	P	S	I	C	R	A	G	E	D	Y	Y	I	A	V	S	T	F	E	W	F	P	G	V	Q	I	H	H	S	K	D	L	V	N	W	H	L	V	A	H	P	L	Q	R	V	S	Q	L	D	M	K	G	N	P	N	S	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S	B		S	S			S							T	T									B	T			S	B							S	S	S	S	S							S	B		S	T	T	T				T	T			T	T		B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	W	A	P	C	L	S	Y	S	D	G	K	F	W	L	I	Y	T	D	V	K	V	V	D	G	A	W	K	D	C	H	N	Y	L	V	T	C	E	T	I	N	G	D	W	S	E	P	I	K	L	N	S	S	G	F	D	A	S	L	F	H	D	T	D	G	K	K	Y	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		S							T	T													S	S	S												S	S	T	T	S											S		S								T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	M	L	W	D	H	R	I	D	R	H	S	F	G	G	I	V	I	Q	E	Y	S	D	K	E	Q	K	L	I	G	K	P	K	V	I	F	E	G	T	D	R	K	L	T	E	A	P	H	L	Y	H	I	G	N	Y	Y	Y	L	L	T	A	E	G	G	T	R	Y	E	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S		S											T	T	T	T				S										T	T												T	T									S		S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	T	I	A	R	S	A	N	I	E	G	P	Y	E	V	H	P	D	N	P	I	L	T	S	W	H	D	P	G	N	P	L	Q	K	C	G	H	A	S	I	V	Q	T	H	T	D	E	W	Y	L	A	H	L	T	G	R	P	I	H	P	D	D	D	S	I	F	Q	Q	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	T	T							T	T			S				T	T		T	T	S	S	S												T	T	S												B			S				T	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	C	P	L	G	R	E	T	A	I	Q	K	L	Y	W	K	D	E	W	P	Y	V	V	G	G	K	E	G	S	L	E	V	D	A	P	S	I	P	E	T	I	F	E	A	T	Y	P	E	V	D	E	F	E	D	S	T	L	N	I	N	F	Q	T	L	R	I	P	F	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T		S										S	S	S					T	T		T	T			S						S	S								S	S		S						S	S	S			T	T					S	S				T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	L	G	S	L	T	Q	A	P	N	H	L	R	L	F	G	H	E	S	L	T	S	T	F	T	Q	A	F	V	A	R	R	W	Q	S	L	H	F	E	A	E	T	A	V	E	F	Y	P	E	N	F	Q	Q	A	A	G	L	V	N	Y	Y	N	T	E	N	W	T	A	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			S	S	S	S	T	T	S						B	S		T	T		S	S												S														S	T	T											T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	T	H	D	E	E	L	G	R	I	L	E	L	T	I	C	D	N	F	S	F	S	Q	P	L	N	N	K	I	V	I	P	R	E	V	K	Y	V	Y	L	R	V	N	I	E	K	D	K	Y	Y	Y	F	Y	S	F	N	K	E	D	W	H	K	I	D	I	A	L	E	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T											T	T							S	S						T	T												T	T								S	S	S	S											G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Sequence	K	L	S	D	D	Y	I	R	G	G	G	F	F	T	G	A	F	V	G	M	Q	C	Q	D	T	G	G	N	H	I	P	A	D	F	R	Y	F	R	Y	K	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S	T	T	T	S		S	S															T	T	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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