Fold library entry viewer: c1ygvA_

Added to library: Tue Mar 16 13:14:45 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	M	S	Y	G	Y	D	E	K	S	T	G	I	S	V	P	G	P	M	G	P	S	G	P	R	G	L	G	P	G	A	G	P	Q	G	F	Q	G	P	G	E	G	E	G	A	S	G	P	M	G	P	R	G	P	G	P	G	K	N	G	D	D	G	E	A	G	K	P	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	E	R	G	P	G	P	Q	G	A	R	G	L	G	T	A	G	L	G	M	G	H	R	G	F	S	G	L	D	G	A	K	G	D	A	G	P	A	G	P	K	G	E	G	S	G	E	N	G	A	G	Q	M	G	P	R	G	L	G	E	R	G	R	G	A	G	P	A	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	G	N	D	G	A	A	G	A	A	G	P	G	P	T	G	P	T	G	P	G	F	G	A	V	G	A	K	G	E	A	G	P	E	G	A	R	G	S	E	G	P	Q	G	V	R	G	E	G	P	G	P	A	G	A	A	G	P	A	G	N	G	A	D	G	Q	G	A	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	N	G	A	G	I	A	G	A	G	F	G	A	R	G	P	S	G	P	E	G	P	S	G	A	G	P	K	G	N	S	G	E	G	A	G	N	K	G	D	T	G	A	K	G	E	G	P	A	G	V	Q	G	P	G	P	A	G	E	E	G	K	R	G	A	R	G	E	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	G	L	G	P	G	E	R	G	G	G	S	R	G	F	G	A	D	G	V	A	G	P	K	G	P	A	G	E	R	G	S	G	P	A	G	P	K	G	S	G	E	A	G	R	G	E	A	G	L	G	A	K	G	L	T	G	S	G	S	G	P	D	G	K	T	G	P	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S	S	S	T	T	T	T			S	S	S																			S																S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	G	E	D	G	R	G	P	A	G	P	G	A	R	G	Q	A	G	V	M	G	F	G	P	K	G	A	A	G	E	G	K	A	G	E	R	G	V	G	P	G	A	V	G	P	A	G	K	D	G	E	A	G	A	Q	G	P	G	P	A	G	P	A	G	E	R	G	E	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B						B	S	T	T	G	G	G	S			T	T	T	B	B	T	T	T	B				T	T	S	S					B			B			B	T	B	B	T	B	S	S	S	B	S	S			T	T	B	S	T	T	T	T	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	A	G	S	G	F	Q	G	L	G	P	A	G	P	G	E	A	G	K	G	E	Q	G	V	G	D	L	G	A	G	P	S	G	A	R	G	E	R	G	F	G	E	R	G	V	E	G	P	G	P	A	G	P	R	G	A	N	G	A	G	N	D	G	A	K	G	D	A	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	B					B			S					B					T								T				S	T	T	T	T	T				B	T	S	T	T				S		S	S	B	B	T				B		S	B	B	S	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	A	G	S	Q	G	A	G	L	Q	G	M	G	E	R	G	A	A	G	L	G	P	K	G	D	R	G	D	A	G	P	K	G	A	D	G	A	P	G	K	D	G	V	R	G	L	T	G	P	I	G	P	G	P	A	G	A	G	D	K	G	E	A	G	P	S	G	P	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		B	S	S		B		B	T				B	B	B	B				T	T		S	B	S	S	B	B	S	S	S	S	B			T	T	S						T			B	T	B				S	S	T	T	T	T	T	T	T	T	S	S	S	T	T	S	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	T	G	A	R	G	A	G	D	R	G	E	G	P	G	P	A	G	F	A	G	P	G	A	D	G	Q	G	A	K	G	E	G	D	A	G	A	K	G	D	A	G	P	G	P	A	G	P	A	G	P	G	P	I	G	N	V	G	A	G	P	G	A	R	G	S	A	G	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S	B	S		B			S			B			B	S	S	S	S	T	T	S	S	B							B				S	B	T	T	B	B	T	T	S	S		B	B	S						S		B					T	B				S			B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	T	G	F	G	A	A	G	R	V	G	P	G	P	S	G	N	A	G	P	G	P	G	P	A	G	K	E	G	S	K	G	P	R	G	E	T	G	P	A	G	R	G	E	V	G	P	G	P	G	P	A	G	E	K	G	A	G	A	D	G	P	A	G	A	G	T	P	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	B							B						T	T	S		S						B				T	B	S	S	S	S	T	T	S	S	S							B			T	T	T		S					B			S	B		B	T	T	B	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Q	G	I	A	G	Q	R	G	V	V	G	L	G	Q	R	G	E	R	G	F	G	L	G	P	S	G	E	G	K	Q	G	P	S	G	A	S	G	E	R	G	P	G	P	M	G	P	G	L	A	G	P	G	E	S	G	R	E	G	A	G	A	E	G	S	G	R	D	G	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	B	S	B	S	S	B	T			B			S	S			T	T			B	S	S	T			S	S	S	B		S	S	S	S	B	T				S	S			S	S	S			B	B		S	S	S				B	S				S	S			S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	K	G	D	R	G	E	T	G	P	A	G	P	G	A	G	A	G	A	P	G	P	V	G	P	A	G	K	S	G	D	R	G	E	T	G	P	A	G	P	I	G	P	V	G	P	A	G	A	R	G	P	A	G	P	Q	G	P	R	G	D	G	E	T	G	E	E	G	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S	S	S	S	S	S	B	B	S			B			S		S	S	S	B	S	T	T	T	T	T	T	T	T	B	S	S	S	S	S	S	S	S	S	S	S	S				T	T	T	B				S	S	S		B	B	S	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	G	I	G	H	R	G	F	S	G	L	Q	G	P	G	P	G	S	G	E	Q	G	P	S	G	A	S	G	P	A	G	P	R	G	P	G	S	A	G	S	G	K	D	G	L	N	G	L	G	P	I	G	G	P	R	G	R	T	G	D	A	G	P	A	G	P	G	P	G	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	B	T	S		S	S	B	S		S	B		B						S	S	S	S	S	B	S		S	S	S		B		B				B	S		S	S	S			S	S				S	S		S		S	S	S	S	S	S							S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.
Sequence	P	G	P	P	S	G	G	Y	D	L	S	F	L	P	Q	P	P	Q	Q	K	A	H	D	K	G	R	Y	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				B										S			S	S			S	S		S	B

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PDB structure

FASTA sequence

Hidden Markov model

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