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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1yc7B_

Fold library idPDB HeaderMoleculeTitle
c1yc7B_PDB header: immune systemChain: B: PDB Molecule: anti-vsg immunoglobulin heavy chain variablePDBTitle: caban33 vhh fragment against vsg


Added to library: Tue Mar 16 12:04:29 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence VQLVESGGGSVQAGGSLRLSCAVSTYSPCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRDN
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Known secondary structure (DSSP)




TT







TTS

STT

GGGTTT
S
 .........80.........90.........100.........110....
Sequence AKNTVYLQMNSLQREDTGMYYCQIQCGVRSIREYWGQGTQVTVS
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Known secondary structure (DSSP) SSS
S

GGG

SSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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