Fold library entry viewer: c1y791_

Added to library: Tue Mar 16 11:55:31 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	M	N	P	F	L	V	Q	S	T	L	P	Y	L	A	P	H	F	D	Q	I	A	N	H	H	Y	R	P	A	F	D	E	G	M	Q	Q	K	R	A	E	I	A	A	I	A	L	N	P	Q	M	P	D	F	N	N	T	I	L	A	L	E	Q	S	G	E	L	L	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	S				S	G	G	G				T	T	T			G	G	G																				T	T	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	T	S	V	F	F	A	M	T	A	A	H	T	N	D	E	L	Q	R	L	D	E	Q	F	S	A	E	L	A	E	L	A	N	D	I	Y	L	N	G	E	L	F	A	R	V	D	A	V	W	Q	R	R	E	S	L	G	L	D	S	E	S	I	R	L	V	E	V	I	H	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S																									S														T	T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	F	V	L	A	G	A	K	L	A	Q	A	D	K	A	K	L	K	V	L	N	T	E	A	A	T	L	T	S	Q	F	N	Q	R	L	L	A	A	N	K	S	G	G	L	V	V	N	D	I	A	Q	L	A	G	M	S	E	Q	E	I	A	L	A	A	E	A	A	R	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T																																	T		S				S		G	G	G	G	T	T	S															T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	L	D	N	K	W	L	I	P	L	L	N	T	T	Q	Q	P	A	L	A	E	M	R	D	R	A	T	R	E	K	L	F	I	A	G	W	T	R	A	E	K	N	D	A	N	D	T	R	A	I	I	Q	R	L	V	E	I	R	A	Q	Q	A	T	L	L	G	F	P	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		T	T								S	S	S	S		G	G	G	G	T																T	T	T		S	S	S	T	T																				T	T		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	A	W	K	I	A	D	Q	M	A	K	T	P	E	A	A	L	N	F	M	R	E	I	V	P	A	A	R	Q	R	A	S	D	E	L	A	S	I	Q	A	V	I	D	K	Q	Q	G	G	F	S	A	Q	P	W	D	W	A	F	Y	A	E	Q	V	R	R	E	K	F	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	T	T		S																																	T	T			S																				S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	E	A	Q	L	K	P	Y	F	E	L	N	T	V	L	N	E	G	V	F	W	T	A	N	Q	L	F	G	I	K	F	V	E	R	F	D	I	P	V	Y	H	P	D	V	R	V	W	E	I	F	D	H	N	G	V	G	L	A	L	F	Y	G	D	F	F	A	R	D	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T	G	G	G		B								T																	S	S	S			S	S	T	T									T	T	S														T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	G	G	A	W	M	G	N	F	V	E	Q	S	T	L	N	K	T	H	P	V	I	Y	N	V	C	N	Y	Q	K	P	A	A	G	E	P	A	L	L	L	W	D	D	V	I	T	L	F	H	E	F	G	H	T	L	H	G	L	F	A	R	Q	R	Y	A	T	L	S	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S										B	T	T	T	T	B															T	T	S			B																					T				S	S	G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	T	P	R	D	F	V	E	F	P	S	Q	I	N	E	H	W	A	T	H	P	Q	V	F	A	R	Y	A	R	H	Y	Q	S	G	A	A	M	P	D	E	L	Q	Q	K	M	R	N	A	S	L	F	N	K	G	Y	E	M	S	E	L	L	S	A	A	L	L	D	M	R	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S															G	G	G	S									B		T	T	T			B												T	T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	H	C	L	E	E	N	E	A	M	Q	D	V	D	D	F	E	L	R	A	L	V	A	E	N	M	D	L	P	A	I	P	P	R	Y	R	S	S	Y	F	A	H	I	F	G	G	G	Y	A	A	G	Y	Y	A	Y	L	W	T	Q	M	L	A	D	D	G	Y	Q	W	F	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			G	G	G																T	T			B	T	T	B			S	S		G	G	G						T	S	S		T	T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Sequence	Q	G	G	L	T	R	E	N	G	L	R	F	R	E	A	I	L	S	R	G	N	S	E	D	L	E	R	L	Y	R	Q	W	R	G	K	A	P	K	I	M	P	M	L	Q	H	R	G	L	N	I	K	W	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S												T	T	T	T	T	T	S	S											S	S				S							T	T

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PDB structure

FASTA sequence

Hidden Markov model

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