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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1xxiF_

Fold library idPDB HeaderMoleculeTitle
c1xxiF_PDB header: transferaseChain: F: PDB Molecule: dna polymerase iii, delta subunit;PDBTitle: adp bound e. coli clamp loader complex


Added to library: Tue Mar 16 12:37:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTDWNAIFSLCQA
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Known secondary structure (DSSP)

TTT


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T





SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence MSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQ
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Known secondary structure (DSSP) S
SS


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S
TTTT

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S


TTTTTSTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence TPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAA
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Known secondary structure (DSSP)


TTTT

SSTT

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 .........220.........230.........240.........250.........260.........270.........280
Sequence HFTPFHWVDALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQ
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Known secondary structure (DSSP)


TTS
TSSTTTT

T
SSSS
T

S
 .........290.........300.........310.........320.........330........
Sequence NRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLAD
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Known secondary structure (DSSP) SS
SS
S
TTS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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