Fold library entry viewer: c1xsiF_

Added to library: Tue Mar 16 12:37:01 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	I	S	D	G	N	W	L	I	Q	P	G	L	N	L	I	H	P	L	Q	V	F	E	V	E	Q	Q	D	N	E	M	V	V	Y	A	A	P	R	D	V	R	E	R	T	W	Q	L	D	T	P	L	F	T	L	R	F	F	S	P	Q	E	G	I	V	G	V	R	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T				T	T																T	T								S	S				S	G	G	G	S	S	S	S												T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	F	Q	G	A	L	N	N	G	P	H	Y	P	L	N	I	L	Q	D	V	K	V	T	I	E	N	T	E	R	Y	A	E	F	K	S	G	N	L	S	A	R	V	S	K	G	E	F	W	S	L	D	F	L	R	N	G	E	R	I	T	G	S	Q	V	K	N	N	G	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S		S													S										S	S							T	T								S	S	S								T	T								T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	D	T	N	N	Q	R	N	Y	M	F	E	R	L	D	L	G	V	G	E	T	V	Y	G	L	G	E	R	F	T	A	L	V	R	N	G	Q	T	V	E	T	W	N	R	D	G	G	T	S	T	E	Q	A	Y	K	N	I	P	F	Y	M	T	N	R	G	Y	G	V	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T												T	T											S		S	S		T	T												S	S	S	S			S									T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	H	P	Q	C	V	S	F	E	V	G	S	E	K	V	S	K	V	Q	F	S	V	E	S	E	Y	L	E	Y	F	V	I	D	G	P	T	P	K	A	V	L	D	R	Y	T	R	F	T	G	R	P	A	L	P	P	A	W	S	F	G	L	W	L	T	T	S	F	T	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S							S	S	S	S	T	T							S	S	S										S	S																				G	G	G	G	S							S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	D	E	A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	H	V	F	H	F	D	C	F	W	M	K	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T										G	G	G	B		T	T			S	S			B		T	T	T		S											T	T	T									S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A	M	G	V	D	C	F	K	T	D	F	G	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S										T		B		B		T	T	S	S	B			B		S	S	S	T	T	B			B		T	T	S																	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	P	T	D	V	Q	W	F	D	G	S	D	P	Q	K	M	H	N	H	Y	A	Y	I	Y	N	E	L	V	W	N	V	L	K	D	T	V	G	E	E	E	A	V	L	F	A	R	S	A	S	V	G	A	Q	K	F	P	V	H	W	G	G	D	C	Y	A	N	Y	E	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	B		T	T																									T	T	T		G	G	G						S		B		T	T	G	G	G	S							S		B	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	E	S	L	R	G	G	L	S	I	G	L	S	G	F	G	F	W	S	H	D	I	G	G	F	E	N	T	A	P	A	H	V	Y	K	R	W	C	A	F	G	L	L	S	S	H	S	R	L	H	G	S	K	S	Y	R	V	P	W	A	Y	D	D	E	S	C	D	V	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T							B	T	T		S	B	S																T	S	S	S						S	S	S				G	G	G	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	F	T	Q	L	K	C	R	M	M	P	Y	L	Y	R	E	A	A	R	A	N	A	R	G	T	P	M	M	R	A	M	M	M	E	F	P	D	D	P	A	C	D	Y	L	D	R	Q	Y	M	L	G	D	N	V	M	V	A	P	V	F	T	E	A	G	D	V	Q	F	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T																		S									T	T		G	G	G	T	T			S					T	T	T								S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	P	E	G	R	W	T	H	L	W	H	N	D	E	L	D	G	S	R	W	H	K	Q	Q	H	G	F	L	S	L	P	V	Y	V	R	D	N	T	L	L	A	L	G	N	N	D	Q	R	P	D	Y	V	W	H	E	G	T	A	F	H	L	F	N	L	Q	D	G	H	E	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S					T	T	T						S	S									T	T								S	S							S		S	S		S		S		T	T	B	S										T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	C	E	V	P	A	A	D	G	S	V	I	F	T	L	K	A	A	R	T	G	N	T	I	T	V	T	G	A	G	E	A	K	N	W	T	L	C	L	R	N	V	V	K	V	N	G	L	Q	D	G	S	Q	A	E	S	E	Q	G	L	V	V	K	P	Q	G	N	A	L	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	S										S	S	S											B	S							T								S	S							T	T							S	S	S
	.	.	.
Sequence	T	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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