Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1ws1A_

Fold library idPDB HeaderMoleculeTitle
c1ws1A_PDB header: hydrolaseChain: A: PDB Molecule: peptide deformylase 1;PDBTitle: structure analysis of peptide deformylase from bacillus2 cereus


Added to library: Tue Mar 16 13:54:23 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MAVLEIIKHPNEVLETPCERVINFDKKLVKLLKDMHETMLIADGVGLAAPQVGVSLQVAVVDVDDDTGKI
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)







SS
GGGGS

B





TT
SGGGGT

BS


TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence ELINPSILEKRGEQVGPEGCLSFPGLYGEVERADYIKVRAQNRRGKVFLLEAEGFLARAIQHEIDHLHGV
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)
TTSTT

TT


TT
 .........150.
Sequence LFTSKVTRYYE
Predicted secondary structure


SS confidence










Known secondary structure (DSSP)
GGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D