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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1wleB_

Fold library idPDB HeaderMoleculeTitle
c1wleB_PDB header: ligaseChain: B: PDB Molecule: seryl-trna synthetase;PDBTitle: crystal structure of mammalian mitochondrial seryl-trna2 synthetase complexed with seryl-adenylate


Added to library: Tue Mar 16 12:03:09 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QDRNLLYEHAREGYSALPLLDMESLCAYPEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEE
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Known secondary structure (DSSP)



TTSS





ST
S

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence EKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPDV
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Known secondary structure (DSSP) TTSSSSSTTTTGGGSTTSSSSSTTTTTS




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence PVGDESQARVLHVVGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLN
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Known secondary structure (DSSP)

SSGGG
S




SS



TT

TT
TTTT
TT


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDL
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Known secondary structure (DSSP) TT



S
T

TTSSS
SS
B

TTTSSS

SSTT
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence PIRMVCSSTCYRAETDTGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELGLHFRV
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Known secondary structure (DSSP) S



SS



SSSTT
S
SSTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence LDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGELQFAHTVNATGCAVP
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Known secondary structure (DSSP)

GGGSTTT
STTTT
TTT

TT


 .........430.........440.........450.........460.........
Sequence RLLIALLESYQQKDGSVLVPPALQPYLGTDRITTPTHVPLQYIGPNQPQ
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Known secondary structure (DSSP) B
TTS


GGGSSS


SS





SSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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