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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1vw4Q_

Fold library idPDB HeaderMoleculeTitle
c1vw4Q_PDB header: ribosomeChain: Q: PDB Molecule: 54s ribosomal protein l40, mitochondrial;PDBTitle: structure of the yeast mitochondrial large ribosomal subunit


Added to library: Sat Apr 12 08:20:46 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGSYQHLSNVGSRVMKRLGNRPKNFLPHSEKFIKKSTPEFMKSDLKEVDEKTSFKKEWKFIPGDRVVVMS
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 .........80.........90.........100.........110.........120.........130.........140
Sequence GASKGNIAVIKSFDKRTNSFILDENGPTKTVPVPKQFWLEGQTSHMITIPVSILGKDLRLVATVAVRDVS
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Known secondary structure (DSSP) STTTTTTTTSS
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 .........150.........160.........170.........180.........190.........200.........210
Sequence FNGSYYDAYKKVMPYRCVQPDLIIPWPKPDPIDVQTNLATDPVIAREQTFWVDSVVRNPIPKKAIPSIRN
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S



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 .........220.........230.........240.........250.........260.........270.........
Sequence PHSKYKRGTLTAKDIAKLVAPEMPLTEVRKSHLAEKKELAEREVPKLTEEDMEAIGARVFEFLEKQKRE
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Known secondary structure (DSSP) TT
TT





S






S







Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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