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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1vw4J_

Fold library idPDB HeaderMoleculeTitle
c1vw4J_PDB header: ribosomeChain: J: PDB Molecule: 54s ribosomal protein l10, mitochondrial;PDBTitle: structure of the yeast mitochondrial large ribosomal subunit


Added to library: Sat Apr 12 08:22:35 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VSILGQLKPSDGSTKSFKRLGRGPSSGLGKTSGRGQKGQKARGKVKSWFEGGQTPIYKLFPKIGFTNVGA
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Known secondary structure (DSSP)

GGGG



TTS






SS
STTSS
TTTTS
SSSSTTSS


TT

TTS

S






SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KPLKELNLKRIQWFHDKNRLHLQPGEVLDMNKMRKLGLVTGPIKYGVKILASGKFHYNLPIALEASRASA
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Known secondary structure (DSSP)


T



SSSS
SSS
S

SS

SS
TT




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KAIAAIEKAGGKFTARYYTPLGLRAHLNPQWFLEKRGRVPLQARPTKRRDIDFYSKEEKRGYLVMEKDKL
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Known secondary structure (DSSP) TT





SS







S
TTTTBTT
 .........220
Sequence LQDIKEAQNK
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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