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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1vw48_

Fold library idPDB HeaderMoleculeTitle
c1vw48_PDB header: ribosomeChain: 8: PDB Molecule: 54s ribosomal protein l13, mitochondrial;PDBTitle: structure of the yeast mitochondrial large ribosomal subunit


Added to library: Sat Apr 12 08:20:30 2014
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence KNRLELIPENFIGEGSRRCKRQKELKLAVSSAPFNQWLSRDKSDNQLDDMILQATEKTLGKVDQDVQFSD
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Known secondary structure (DSSP)






TTT


S

S







S


T
S

SSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LVAKFQFTKFLQSKSGYLIPDYELTTLSTPLQFKRYIKEKILPSANDPKLAYKEAEPNAIHPFSDNYASP
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Known secondary structure (DSSP) SS




S
STTS

TT
TT




GGGG
SS
 .........150.........160.........170.........180..
Sequence NIYVVNDVTSKEQKSKYDTIMKEIQKLEDDATRKALETARSA
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Known secondary structure (DSSP) S









Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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