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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1vw45_

Fold library idPDB HeaderMoleculeTitle
c1vw45_PDB header: ribosomeChain: 5: PDB Molecule: 54s ribosomal protein l3, mitochondrial;PDBTitle: structure of the yeast mitochondrial large ribosomal subunit


Added to library: Sat Apr 12 08:25:01 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPESELAKYKEYYQGLKSTVNEIPESVASKSPSLRTLHKRLQLPNELTYSTLSRCLTCPSAKLPDKINNP
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Known secondary structure (DSSP)






TT

TTS
TB



S

SSTT
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence TKGAAFVNTVPTNKYLDNHGLNIMGKNLLSYHVTKSIIQKYPRLPTVVLNAAVNAYISEAVLAHIAKYWG
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Known secondary structure (DSSP) TTT
B

S




TTSSS
SS


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence IEVETTSVLSRYLKMEPFEFTLGRLKFFNNSLNSKDGIELITGKNFSETSALAMSVRSIIAAIWAVTEQK
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Known secondary structure (DSSP)

B

S
T

SBBS


BSSSGGG





GGG
TSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DSQAVYRFIDDHIMSRKLDITKMFQFEQPTRELAMLCRREGLEKPVSKLVAESGRLSKSPVFIVHVFSGE
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Known secondary structure (DSSP)
TTTTTS


GGGG


SSTT





SSSS
TT
 .........290.........300.........310.........320......
Sequence ETLGEGYGSSLKEAKARAATDALMKWYCYEPLAQQEPVIDPGTVVV
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Known secondary structure (DSSP) SSS



SSS











Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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