PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c1vw43_

Fold library id	PDB Header	Molecule	Title
c1vw43_	PDB header: ribosome	Chain: 3: PDB Molecule: 54s ribosomal protein l27, mitochondrial;	PDBTitle: structure of the yeast mitochondrial large ribosomal subunit

Links to external resources
Added to library: Sat Apr 12 08:21:37 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L T R P W K K Y R D G E L F Y G L S K V G N K R V P L T T K Q G N K T M Y K G T R A S G I G R H T K F G G Y V I N W K K V R T Y V T P D M V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S
S
S S S S
S
S
S S S S
S S
S
S S
S S S
G G G
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . .

Sequence N F E L K P Y V N A N V P P L K H E F K G G G P L D P R L Q L L K I K E Y I V N G R V Q S E G A T D S C Y K E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T T S
T T
S S S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

View in Jmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg
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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	T	R	P	W	K	K	Y	R	D	G	E	L	F	Y	G	L	S	K	V	G	N	K	R	V	P	L	T	T	K	Q	G	N	K	T	M	Y	K	G	T	R	A	S	G	I	G	R	H	T	K	F	G	G	Y	V	I	N	W	K	K	V	R	T	Y	V	T	P	D	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T			S			S			S	S	S	S		S						S				S	S	S	S		S	S						S				S	S				S	S	S						G	G	G								S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Sequence	N	F	E	L	K	P	Y	V	N	A	N	V	P	P	L	K	H	E	F	K	G	G	G	P	L	D	P	R	L	Q	L	L	K	I	K	E	Y	I	V	N	G	R	V	Q	S	E	G	A	T	D	S	C	Y	K	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			S	S			T	T	S												T	T															S	S	S			S	S