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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1vt4K_

Fold library idPDB HeaderMoleculeTitle
c1vt4K_PDB header: apoptosisChain: K: PDB Molecule: apaf-1 related killer dark;PDBTitle: structure of the drosophila apoptosome


Added to library: Thu Jan 10 01:10:24 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE
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Known secondary structure (DSSP)

TTTTTTTTTTTTS


STS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE
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Known secondary structure (DSSP) T
TT


T
S


S



 .........150.........160.........170.........180.........190.........200.........210
Sequence LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR
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Known secondary structure (DSSP)

SS


STTSS
SS



SSS
SSSTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT
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Known secondary structure (DSSP) S


SSSTTSS
S


SS


S
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT
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Known secondary structure (DSSP)

SSSS





TTT



S
SS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI
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Known secondary structure (DSSP) S
TTTTSS
TTS

SS
STSSSSSB
SSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV
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Known secondary structure (DSSP) B


S

TT


SSS




SS
TSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence FLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD
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Known secondary structure (DSSP)
STT



SSS

S
SSGGGS
S
SS


S
T
 .........570.........580.........590.........600.........610.........620.........630
Sequence LLRIALMAEDEAIFEEAHKQVQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TT
TT











B






S
SS




SSSS

SSS

 .........640.........650.........660.........670.........680.........690.........700
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SSS








SS
S




SSSS

TTS



S


SS



 .........710.........720.........730.........740.........750.........760.........770
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTS





SS

SSSSSS




TT
SSS



 .........780.........790.........800.........810.........820.........830.........840
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SSS
SSSS

TTTT

S



SSS


S


SS
S


 .........850.........860.........870.........880.........890.........900.........910
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)






SSS



TTS




SSSS
S





S
S
SSSS

S
 .........920.........930.........940.........950.........960.........970.........980
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SS

S
SSS




SSS

SSSS
SSS



SS
SS
S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

SS

S
SSS
SS

SSS


SS



S
SSSS

GGG
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SS




SS

SGGG
TTS

SSSSS
S



S

STTTTSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S
SSS

TT


SSTT


SSS

S






S

S
 .........1200.........1210.....
Sequence XXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)
SS
S

SSS


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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