PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1vs1B_

Fold library id	PDB Header	Molecule	Title
c1vs1B_	PDB header: transferase	Chain: B: PDB Molecule: 3-deoxy-7-phosphoheptulonate synthase;	PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep

Links to external resources
Added to library: Tue Mar 16 13:28:41 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F K G V K L A L K S E E R R E T V V E V E G V R I G G G S K A V I A G P C S V E S W E Q V R E A A L A V K E A G A H M L R G G A F K P R T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T B
S S
S
T T B T T B
S B
T
S
B S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P Y S F Q G L G L E G L K L L R R A G D E A G L P V V T E V L D P R H V E T V S R Y A D M L Q I G A R N M Q N F P L L R E V G R S G K P V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
G G G
S
G G G T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L K R G F G N T V E E L L A A A E Y I L L E G N W Q V V L V E R G I R T F E P S T R F T L D V A A V A V L K E A T H L P V I V D P S H P A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
B
S
S S S S B
B S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . .

Sequence R R S L V P A L A K A G L A A G A D G L I V E V H P N P E E A L S D A K Q Q L T P G E F A R L M G E L R W H R L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G T T
S B
S S G G G
S S
G G G
B
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	K	G	V	K	L	A	L	K	S	E	E	R	R	E	T	V	V	E	V	E	G	V	R	I	G	G	G	S	K	A	V	I	A	G	P	C	S	V	E	S	W	E	Q	V	R	E	A	A	L	A	V	K	E	A	G	A	H	M	L	R	G	G	A	F	K	P	R	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	T	T	B			S	S		S							T	T				B	T	T	B								S	B																		T		S					B	S	S				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	Y	S	F	Q	G	L	G	L	E	G	L	K	L	L	R	R	A	G	D	E	A	G	L	P	V	V	T	E	V	L	D	P	R	H	V	E	T	V	S	R	Y	A	D	M	L	Q	I	G	A	R	N	M	Q	N	F	P	L	L	R	E	V	G	R	S	G	K	P	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S					T															T										G	G	G									S						G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	K	R	G	F	G	N	T	V	E	E	L	L	A	A	A	E	Y	I	L	L	E	G	N	W	Q	V	V	L	V	E	R	G	I	R	T	F	E	P	S	T	R	F	T	L	D	V	A	A	V	A	V	L	K	E	A	T	H	L	P	V	I	V	D	P	S	H	P	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T																T	T											B			S			S	S	S	S	B													B	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Sequence	R	R	S	L	V	P	A	L	A	K	A	G	L	A	A	G	A	D	G	L	I	V	E	V	H	P	N	P	E	E	A	L	S	D	A	K	Q	Q	L	T	P	G	E	F	A	R	L	M	G	E	L	R	W	H	R	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	G	G	G											T	T		S						B		S	S	G	G	G		S	S		G	G	G		B															T	T