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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1vioA_

Fold library idPDB HeaderMoleculeTitle
c1vioA_PDB header: lyaseChain: A: PDB Molecule: ribosomal small subunit pseudouridine synthase a;PDBTitle: crystal structure of pseudouridylate synthase


Added to library: Tue Mar 16 12:23:54 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLRLDKFIAENVGLTRSQATKAIRQSAVKINGEIVKSGSVQISQEDEIYFEDELLTWIEEGQYFMLNKPQ
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Known secondary structure (DSSP)
T

TT
TT


TT

TTS
TT

SS




T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GCVCSNDDYPTIYQFFDYPLAGKLHSAGRLDVDTTGLVLLTDDGQWSHRITSPKHHCEKTYLVTLADPVE
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Known secondary structure (DSSP) T
BSS




BGGGGS
TTGGGG
SS


TT
S

TTS


SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence ENYSAACAEGILLRGEKEPTKPAKLEILDDYNVNLTISEGRYHQVKRMFAALGNKVVGLHRWKIGDVVLD
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Known secondary structure (DSSP) TT



TT
SS





SSSS


TTTT

TT

 .........220.........230
Sequence ESLEEGEYRPLTQSEIEKLV
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SS confidence



















Known secondary structure (DSSP) TT

TT


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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