Fold library entry viewer: c1vdeA_

Added to library: Tue Mar 16 13:22:45 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	C	F	A	K	G	T	N	V	L	M	A	D	G	S	I	E	C	I	E	N	I	E	V	G	N	K	V	M	G	K	D	G	R	P	R	E	V	I	K	L	P	R	G	R	E	T	M	Y	S	V	V	Q	K	S	Q	H	R	A	H	K	S	D	S	S	R	E	V	P	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		T	T					B	T	T	S					G	G	G			T	T						T	T	S																						S	S		B			S	S	S		S		S		B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	K	F	T	C	N	A	T	H	E	L	V	V	R	T	P	R	S	V	R	R	L	E	V	I	T	F	E	M	G	Q	K	K	A	P	D	G	R	I	V	E	L	V	K	E	V	S	K	S	Y	P	I	S	E	G	P	E	R	A	N	E	L	V	E	S	Y	R	K	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						T	T																											S	S	S															S	S	S		T	T												S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	K	A	Y	F	E	W	T	I	E	A	R	D	L	S	L	L	G	S	H	V	R	K	A	T	Y	Q	T	Y	A	P	I	L	Y	E	N	D	H	F	F	D	Y	M	Q	K	S	K	F	H	L	T	I	E	G	P	K	V	L	A	Y	L	L	G	L	W	I	G	D	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S								G	G	G	G	G	G	S																													S	S	S				S	S																B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	D	R	A	T	F	S	V	D	S	R	D	T	S	L	M	E	R	V	T	E	Y	A	E	K	L	N	L	C	A	E	Y	K	D	R	K	E	P	Q	V	A	K	T	V	N	L	Y	S	K	V	L	N	T	E	N	P	L	W	D	A	I	V	G	L	G	F	L	K	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S						S	S															T	T									S	S	T	T	S													T	T										T	T	S			T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	K	N	I	P	S	F	L	S	T	D	N	I	G	T	R	E	T	F	L	A	G	L	I	D	S	D	G	Y	V	T	D	E	H	G	I	K	A	T	I	K	T	I	H	T	S	V	R	D	G	L	V	S	L	A	R	S	L	G	L	V	V	S	V	N	A	E	P	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	G	G	S																						T	T	S								S															T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	H	K	I	S	Y	A	I	Y	M	S	G	G	D	V	L	L	N	V	L	S	K	C	A	G	S	K	K	F	R	P	A	P	A	A	A	F	A	R	E	C	R	G	F	Y	F	E	L	Q	E	L	K	E	D	D	Y	Y	G	I	T	L	S	D	D	S	D	H	Q	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																		T	T			S	T	T	T						S	S																												S	S	S
	.	.	.	.	.	.	.	.	.
Sequence	L	A	N	Q	V	V	V	H	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	T	T		B

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PDB structure

FASTA sequence

Hidden Markov model

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