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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1v06A_

Fold library idPDB HeaderMoleculeTitle
c1v06A_PDB header: dna-binding proteinChain: A: PDB Molecule: hmg box-containing protein 1;PDBTitle: axh domain of the transcription factor hbp1 from m.musculus


Added to library: Tue Mar 16 13:36:21 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSTIWHCFLKGTRLCFHKESNKEWQDVEDFARAASCDNEEEIQMGTHKGYGSDGLKLLSHEESVSFGESV
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Known secondary structure (DSSP)


SBTTB
TT
TTSS

S
TTSS

TTT
TT
STTTTSS
TT
 .........80.........90.........100.........110.........120.........130........
Sequence LKLTFDPGTVEDGLLTVECKLDHPFYVKNKGWSSFYPSLTVVQHGIPCCEIHIGDVCLPPGHPDAINF
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Known secondary structure (DSSP)
SSGGG


TT

TTTSSS




TT


TT
TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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