Fold library entry viewer: c1uaaB_

Added to library: Tue Mar 16 13:14:21 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	L	N	P	G	Q	Q	Q	A	V	E	F	V	T	G	P	C	L	V	L	A	G	A	G	S	G	K	T	R	V	I	T	N	K	I	A	H	L	I	R	G	C	G	Y	Q	A	R	H	I	A	A	V	T	F	T	N	K	A	A	R	E	M	K	E	R	V	G	Q	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S								T	T	S																					G	G	G						S	S															S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	R	K	E	A	R	G	L	M	I	S	T	F	H	T	L	G	L	D	I	I	K	R	E	Y	A	A	L	G	M	K	A	N	F	S	L	F	D	D	T	D	Q	L	A	L	L	K	E	L	T	E	G	L	I	E	D	D	K	V	L	L	Q	Q	L	I	S	T	I	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T		S																			T	T	S	S							B		T	T											T	S	S	S	S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	W	K	N	D	L	K	T	P	S	Q	A	A	A	S	A	I	G	E	R	D	R	I	F	A	H	C	Y	G	L	Y	D	A	H	L	K	A	C	N	V	L	D	F	D	D	L	I	L	L	P	T	L	L	L	Q	A	N	E	E	V	R	K	R	W	Q	N	K	I	R	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			T	T					T			S																					T		B		T	T					T																	T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	V	D	E	Y	Q	D	T	N	T	S	Q	Y	E	L	V	K	L	L	V	G	S	R	A	R	F	T	V	V	G	D	D	D	Q	S	I	Y	S	W	R	G	A	R	P	Q	N	L	V	L	L	S	Q	D	F	P	A	L	K	V	I	K	L	E	Q	N	Y	R	S	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		G	G	G		B											S	S	S	S									G	G	G			G	G	G	G	T	B		T	T								S		T	T										S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	I	L	K	A	A	N	I	L	I	A	N	N	P	H	V	F	E	K	R	L	F	S	E	L	G	Y	G	A	E	L	K	V	L	S	A	N	N	E	E	H	E	A	E	R	V	T	G	E	L	I	A	H	H	F	V	N	K	T	Q	Y	K	D	Y	A	I	L	Y	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	S			S	S							S	S																																	T			G	G	G						S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	H	Q	S	R	V	F	E	K	F	L	M	Q	N	R	I	P	Y	K	I	S	G	G	T	S	F	F	S	R	P	E	I	K	D	L	L	A	Y	L	R	V	L	T	N	P	D	D	D	S	A	F	L	R	I	V	N	T	P	K	R	E	I	G	P	A	T	L	K	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													T	T							S	S			G	G	G	S																T	T									T	T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	E	W	A	M	T	R	N	K	S	M	F	T	A	S	F	D	M	G	L	S	Q	T	L	S	G	R	G	Y	E	A	L	T	R	F	T	H	W	L	A	E	I	Q	R	L	A	E	R	E	P	I	A	A	V	R	D	L	I	H	G	M	D	Y	E	S	W	L	Y	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S						T	T		T	T	T	T	T	T	S		T	T	S	T	T	T																T	T														T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	P	S	P	K	A	A	E	M	R	M	K	N	V	N	Q	L	F	S	W	M	T	E	M	L	E	G	S	E	L	D	E	P	M	T	L	T	Q	V	V	T	R	F	T	L	R	D	E	E	L	D	Q	V	Q	L	M	T	L	H	A	S	K	G	L	E	F	P	Y	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S																										S	S	S														T	T																T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	M	V	G	M	E	E	G	F	L	P	H	Q	S	S	I	D	E	D	N	I	D	E	E	R	R	L	A	Y	V	G	I	T	R	A	Q	K	E	L	T	F	T	L	C	K	E	R	R	Q	Y	G	E	L	V	R	P	E	P	S	R	F	L	L	E	L	P	Q	D	D	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	T	T	T	T	T	T					T	T	S															T															S	S	S	S						B							S		G	G	G
	.	.	.
Sequence	W	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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