PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1u9nA_

Fold library id	PDB Header	Molecule	Title
c1u9nA_	PDB header: dna binding protein	Chain: A: PDB Molecule: transcriptional repressor ethr;	PDBTitle: crystal structure of the transcriptional regulator ethr in2 a ligand bound conformation opens therapeutic perspectives3 against tuberculosis and leprosy

Links to external resources
Added to library: Tue Mar 16 14:20:09 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G D D R E L A I L A T A E N L L E D R P L A D I S V D D L A K G A G I S R P T F Y F Y F P S K E A V L L T L L D R V V N Q A D X A L Q T L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
G G G
T S
T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E N P A D T D R E N X W R T G I N V F F E T F G S H K A V T R A G Q A A R A T S V E V A E L W S T F X Q K W I A Y T A A V I D A E R D R G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T
T T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . .

Sequence A P R T L P A H E L A T A L N L X N E R T L F A S F A G E Q P S V P E A R V L D T L V H I W V T S I Y G E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	D	D	R	E	L	A	I	L	A	T	A	E	N	L	L	E	D	R	P	L	A	D	I	S	V	D	D	L	A	K	G	A	G	I	S	R	P	T	F	Y	F	Y	F	P	S	K	E	A	V	L	L	T	L	L	D	R	V	V	N	Q	A	D	X	A	L	Q	T	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T	S		G	G	G											T	S						T	T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	N	P	A	D	T	D	R	E	N	X	W	R	T	G	I	N	V	F	F	E	T	F	G	S	H	K	A	V	T	R	A	G	Q	A	A	R	A	T	S	V	E	V	A	E	L	W	S	T	F	X	Q	K	W	I	A	Y	T	A	A	V	I	D	A	E	R	D	R	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			S	S																			T												T	T	T																													T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Sequence	A	P	R	T	L	P	A	H	E	L	A	T	A	L	N	L	X	N	E	R	T	L	F	A	S	F	A	G	E	Q	P	S	V	P	E	A	R	V	L	D	T	L	V	H	I	W	V	T	S	I	Y	G	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				S																							T		S	S