Fold library entry viewer: c1u6gA_

Added to library: Tue Mar 16 14:32:13 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	D	Q	I	W	D	D	L	R	A	G	I	Q	Q	V	Y	T	R	Q	S	M	A	K	S	R	Y	M	E	L	Y	T	H	V	Y	N	Y	C	T	S	V	G	L	E	L	Y	K	R	L	K	E	F	L	K	N	Y	L	T	N	L	L	K	D	G	E	D	L	M	D	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T																							T	T																				T	T	T	T			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	L	K	F	Y	T	Q	Q	W	E	D	Y	R	F	S	S	K	V	L	N	G	I	C	A	Y	L	N	R	H	W	V	R	R	E	C	K	G	I	Y	E	I	Y	S	L	A	L	V	T	W	R	D	C	L	F	R	P	L	N	K	Q	V	T	N	A	V	L	K	L	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T						T	T	T																							T	T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	E	R	N	G	E	T	I	N	T	R	L	I	S	G	V	V	Q	S	Y	V	E	L	G	L	G	P	T	L	T	V	Y	K	E	S	F	E	S	Q	F	L	A	D	T	E	R	F	Y	T	R	E	S	T	E	F	L	Q	Q	N	P	V	T	E	Y	M	K	K	A	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T					T													T													T																							S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	L	L	E	E	Q	R	R	V	Q	V	Y	L	H	E	S	T	Q	D	E	L	A	R	K	C	E	Q	V	L	I	E	K	H	L	E	I	F	H	T	E	F	Q	N	L	L	D	A	D	K	N	E	D	L	G	R	M	Y	N	L	V	S	R	I	Q	D	G	L	G	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S		G	G	G													T	T	T	S														S			T	T										T	T	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	K	L	L	E	T	H	I	H	N	Q	G	L	A	A	I	E	K	C	G	E	A	A	L	N	D	P	K	M	Y	V	Q	T	V	L	D	V	H	K	K	Y	N	A	L	V	M	S	A	F	N	N	D	A	G	F	V	A	A	L	D	K	A	C	G	R	F	I	N	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	T	T																										T	T	T	T	T																		S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	V	T	K	M	A	Q	S	S	S	K	S	P	E	L	L	A	R	Y	C	D	S	L	L	K	K	E	E	A	E	L	E	D	T	L	N	Q	V	M	V	V	F	K	Y	I	E	D	K	D	V	F	Q	K	F	Y	A	K	M	L	A	K	R	L	V	H	Q	N	S	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	T	T																																				S																			S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	D	A	E	A	S	M	I	S	K	L	K	Q	A	C	G	F	E	Y	T	S	K	L	Q	R	M	F	Q	D	I	G	V	S	K	D	L	N	E	Q	F	K	K	H	L	T	N	S	E	P	L	D	L	D	F	S	I	Q	V	L	S	S	G	S	W	P	F	Q	Q	S	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S		S																													T	S				S	S									G	G	G							S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	F	A	L	P	S	E	L	E	R	S	Y	Q	R	F	T	A	F	Y	A	S	R	H	S	G	R	K	L	T	W	L	Y	Q	L	S	K	G	E	L	V	T	N	C	F	K	N	R	Y	T	L	Q	A	S	T	F	Q	M	A	I	L	L	Q	Y	N	T	E	D	A	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T							G	G	G								T	T	S	S	S															G	G	G	G	T		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	Q	Q	L	T	D	S	T	Q	I	K	M	D	I	L	A	Q	V	L	Q	I	L	L	K	S	K	L	L	V	L	E	D	E	N	A	N	V	D	E	V	E	L	K	P	D	T	L	I	K	L	Y	L	G	Y	K	N	K	K	L	R	V	N	I	N	V	P	M	K	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T																		T	S				S	S	S	S			G	G	G					T	T	S							S				S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	K	Q	E	Q	E	T	T	H	K	N	I	E	E	D	R	K	L	L	I	Q	A	A	I	V	R	I	M	K	M	R	K	V	L	K	H	Q	Q	L	L	G	E	V	L	T	Q	L	S	S	R	F	K	P	R	V	P	V	I	K	K	C	I	D	I	L	I	E	K	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													T	S	S	S																T	T	T																		T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
Sequence	L	E	R	V	D	G	E	K	D	T	Y	S	Y	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T

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PDB structure

FASTA sequence

Hidden Markov model

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