PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1u5pA_

Fold library id	PDB Header	Molecule	Title
c1u5pA_	PDB header: structural protein	Chain: A: PDB Molecule: spectrin alpha chain, brain;	PDBTitle: crystal structure of repeats 15 and 16 of chicken brain2 alpha spectrin

Links to external resources
Added to library: Tue Mar 16 14:21:56 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A N K Q Q N F N T G I K D F D F W L S E V E A L L A S E D Y G K D L A S V N N L L K K H Q L L E A D I S A H E D R L K D L N S Q A D S L M T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S S A F D T S Q V K D K R E T I N G R F Q R I K S M A A A R R A K L N E S H R L H Q F F R D M D D E E S W I K E K K L L V S S E D Y G R D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T G V Q N L R K K H K R L E A E L A A H E P A I Q G V L D T G K K L S D D N T I G K E E I Q Q R L A Q F V D H W K E L K Q L A A A R G Q R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S T

.

Sequence E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	N	K	Q	Q	N	F	N	T	G	I	K	D	F	D	F	W	L	S	E	V	E	A	L	L	A	S	E	D	Y	G	K	D	L	A	S	V	N	N	L	L	K	K	H	Q	L	L	E	A	D	I	S	A	H	E	D	R	L	K	D	L	N	S	Q	A	D	S	L	M	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T						S	S																																					T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	S	A	F	D	T	S	Q	V	K	D	K	R	E	T	I	N	G	R	F	Q	R	I	K	S	M	A	A	A	R	R	A	K	L	N	E	S	H	R	L	H	Q	F	F	R	D	M	D	D	E	E	S	W	I	K	E	K	K	L	L	V	S	S	E	D	Y	G	R	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S		T																																																								T						S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	G	V	Q	N	L	R	K	K	H	K	R	L	E	A	E	L	A	A	H	E	P	A	I	Q	G	V	L	D	T	G	K	K	L	S	D	D	N	T	I	G	K	E	E	I	Q	Q	R	L	A	Q	F	V	D	H	W	K	E	L	K	Q	L	A	A	A	R	G	Q	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																					T		S	S		S																												T
	.
Sequence	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)