PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1u39A_

Fold library id	PDB Header	Molecule	Title
c1u39A_	PDB header: protein transport	Chain: A: PDB Molecule: amyloid beta a4 precursor protein-binding,	PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains

Links to external resources
Added to library: Tue Mar 16 13:04:33 2010

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Sequence P P V T T V L I R R P D L R Y Q L G F S V Q N G I I C S L M R G G I A E R G G V R V G H R I I E I N G Q S V V A T P H E K I V H I L S N A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
S T T
T T S T T
T T
T T G G G S
T

. . . . . . . . . 80

Sequence G E I H M K T M P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	P	V	T	T	V	L	I	R	R	P	D	L	R	Y	Q	L	G	F	S	V	Q	N	G	I	I	C	S	L	M	R	G	G	I	A	E	R	G	G	V	R	V	G	H	R	I	I	E	I	N	G	Q	S	V	V	A	T	P	H	E	K	I	V	H	I	L	S	N	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S	S				S					T	T							T	T	S	T					T			T	T							T	T			G	G	G	S											T
	.	.	.	.	.	.	.	.	.	80
Sequence	G	E	I	H	M	K	T	M	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)