Fold library entry viewer: c1u22A_

Added to library: Tue Mar 16 12:38:25 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	S	H	I	V	G	Y	P	R	X	G	P	K	R	E	L	K	F	A	L	E	S	F	W	D	G	K	S	T	A	E	D	L	Q	K	V	S	A	D	L	R	S	S	I	W	K	Q	X	S	A	A	G	T	K	F	I	P	S	N	T	F	A	H	Y	D	Q	V	L	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S				S	S		T	T													T	S	S																						T	T	T		S	B				S				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	A	X	L	G	A	V	P	P	R	Y	G	Y	T	G	G	E	I	G	L	D	V	Y	F	S	X	A	R	G	N	A	S	V	P	A	X	E	X	T	K	W	F	D	T	N	Y	H	Y	I	V	P	E	L	G	P	E	V	N	F	S	Y	A	S	H	K	A	V	N	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T				G	G	G				S	S	S														S	S	S									T	T	S	S										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	E	A	K	A	L	G	V	D	T	V	P	V	L	V	G	P	V	S	Y	L	L	L	S	K	A	A	K	G	V	D	K	S	F	E	L	L	S	L	L	P	K	I	L	P	I	Y	K	E	V	I	T	E	L	K	A	A	G	A	T	W	I	Q	L	D	E	P	V	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T																					T	T	S		T	T			G	G	G	G																			T		S							G	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	X	D	L	E	G	Q	K	L	Q	A	F	T	G	A	Y	A	E	L	E	S	T	L	S	G	L	N	V	L	V	E	T	Y	F	A	D	I	P	A	E	A	Y	K	T	L	T	S	L	K	G	V	T	A	F	G	F	D	L	V	R	G	T	K	T	L	D	L	V	K	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																						S	S	S								S	S											T	T		S	S								T	T	T		T	T							T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	P	E	G	K	Y	L	F	A	G	V	V	D	G	R	N	I	W	A	N	D	F	A	A	S	L	S	T	L	Q	A	L	E	G	I	V	G	K	D	K	L	V	V	S	T	S	C	S	L	L	H	T	A	V	D	L	I	N	E	T	K	L	D	D	E	I	K	S	W	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S										S	S	S		B																				S	S							S	S		G	G	G	S		S		S	T	T			S	S						T	T	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	F	A	A	Q	K	V	V	E	V	N	A	L	A	K	A	L	A	G	Q	K	D	E	A	L	F	S	A	N	A	A	A	L	A	S	R	R	S	S	P	R	V	T	N	E	G	V	Q	K	A	A	A	A	L	K	G	S	D	H	R	R	A	T	N	V	S	A	R	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T	T																					T	T	T			S	G	G	G	T	T	T	T	T	T	S	S				S		S			T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	Q	Q	K	K	L	N	L	P	I	L	P	T	T	T	I	G	S	F	P	Q	T	V	E	L	R	E	D	Y	V	K	A	I	K	E	E	I	K	K	V	V	D	L	Q	E	E	L	D	I	D	V	L	V	H	G	E	P	E	R	N	D	X	V	E	Y	F	G	E	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T				S	S		B				S						S																							T	T			S	S	B					T	T		S	S	T	T						T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	G	F	A	F	T	A	N	G	W	V	Q	S	Y	G	S	R	C	V	K	P	P	V	I	Y	G	D	V	S	R	P	K	A	X	T	V	F	W	S	A	X	A	Q	S	X	T	S	R	P	X	K	G	X	L	T	G	P	V	T	I	L	N	W	S	F	V	R	N	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S					S	S							T	T										S						S		S	S	T							T	T	S		S	S		B													S	S				T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	R	H	E	T	C	Y	Q	I	A	L	A	I	K	D	E	V	E	D	L	E	K	G	G	I	G	V	I	Q	I	D	E	A	A	L	R	E	G	L	P	L	R	K	S	E	H	A	F	Y	L	D	W	A	V	H	S	F	R	I	T	N	C	G	V	Q	D	S	T	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T									T	T	S	S	T	T			S	S	G	G	G																	T	T			S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	H	T	H	X	C	Y	S	H	F	N	D	I	I	H	S	I	I	D	X	D	A	D	V	I	T	I	E	N	S	R	S	D	E	K	L	L	S	V	F	R	E	G	V	K	Y	G	A	G	I	G	P	G	V	Y	D	I	H	S	P	R	I	P	S	S	E	E	I	A	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			G	G	G						T	S			S							S	S	S		S	S	G	G	G	G	T	T	T	T	T				S							S		T	T	S		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
Sequence	V	N	K	X	L	A	V	L	E	Q	N	I	L	W	V	N	P	D	C	G	L	K	T	R	K	Y	T	E	V	K	P	A	L	K	N	X	V	D	A	A	K	L	I	R	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T	T	T	S		S	S	S	B		B			S	S		S	T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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