PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c1tw3A_

Fold library id	PDB Header	Molecule	Title
c1tw3A_	PDB header: transferase	Chain: A: PDB Molecule: carminomycin 4-o-methyltransferase;	PDBTitle: crystal structure of carminomycin-4-o-methyltransferase2 (dnrk) in complex with s-adenosyl-l-homocystein (sah) and3 4-methoxy-e-rhodomycin t (m-et)

Links to external resources
Added to library: Tue Mar 16 12:54:40 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q I D A L R T L I R L G S L H T P M V V R T A A T L R L V D H I L A G A R T V K A L A A R T D T R P E A L L R L I R H L V A I G L L E E D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T T
B T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P G E F V P T E V G E L L A D D H P A A Q R A W H D L T Q A V A R A D I S F T R L P D A I R T G R P T Y E S I Y G K P F Y E D L A G R P D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T G G G G S T T S T T
T
T T S G G G G G G
S S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R A S F D S L L A C D Q D V A F D A P A A A Y D W T N V R H V L D V G G G K G G F A A A I A R R A P H V S A T V L E M A G T V D T A R S Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T T T S
T T
S T
T T S
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence K D E G L S D R V D V V E G D F F E P L P R K A D A I I L S F V L L N W P D H D A V R I L T R C A E A L E P G G R I L I H E R D D L H E N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T
T T S
S S
S
G G G S
T
B
G G G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340

Sequence F N E Q F T E L D L R M L V F L G G A L R T R E K W D G L A A S A G L V V E E V R Q L P S P T I P Y D L S L L V L A P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
B T T
S S S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	I	D	A	L	R	T	L	I	R	L	G	S	L	H	T	P	M	V	V	R	T	A	A	T	L	R	L	V	D	H	I	L	A	G	A	R	T	V	K	A	L	A	A	R	T	D	T	R	P	E	A	L	L	R	L	I	R	H	L	V	A	I	G	L	L	E	E	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S												T	T							T	T			B									T																T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	G	E	F	V	P	T	E	V	G	E	L	L	A	D	D	H	P	A	A	Q	R	A	W	H	D	L	T	Q	A	V	A	R	A	D	I	S	F	T	R	L	P	D	A	I	R	T	G	R	P	T	Y	E	S	I	Y	G	K	P	F	Y	E	D	L	A	G	R	P	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						T	T	G	G	G	G	S	T	T	S	T	T						T		T	T	S						G	G	G	G	G	G																	S	S								T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	A	S	F	D	S	L	L	A	C	D	Q	D	V	A	F	D	A	P	A	A	A	Y	D	W	T	N	V	R	H	V	L	D	V	G	G	G	K	G	G	F	A	A	A	I	A	R	R	A	P	H	V	S	A	T	V	L	E	M	A	G	T	V	D	T	A	R	S	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T	T	T	T	T							S			T	T		S						T		T	T	S											T	T									T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	D	E	G	L	S	D	R	V	D	V	V	E	G	D	F	F	E	P	L	P	R	K	A	D	A	I	I	L	S	F	V	L	L	N	W	P	D	H	D	A	V	R	I	L	T	R	C	A	E	A	L	E	P	G	G	R	I	L	I	H	E	R	D	D	L	H	E	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		T	T	T								T	T	S			S	S									S		G	G	G	S															T														B		G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Sequence	F	N	E	Q	F	T	E	L	D	L	R	M	L	V	F	L	G	G	A	L	R	T	R	E	K	W	D	G	L	A	A	S	A	G	L	V	V	E	E	V	R	Q	L	P	S	P	T	I	P	Y	D	L	S	L	L	V	L	A	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S															S					B											T	T												S	S	S	S