PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1tteA_

Fold library id	PDB Header	Molecule	Title
c1tteA_	PDB header: ligase	Chain: A: PDB Molecule: ubiquitin-conjugating enzyme e2-24 kda;	PDBTitle: the structure of a class ii ubiquitin-conjugating enzyme,2 ubc1.

Links to external resources
Added to library: Tue Mar 16 12:07:56 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S S R A K R I M K E I Q A V K D D P A A H I T L E F V S E S D I H H L K G T F L G P P G T P Y E G G K F V V D I E V P M E Y P F K P P K M Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T
T T
S S S S
T T
S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F D T K V Y H P N I S S V T G A I C L D I L R N A W S P V I T L K S A L I S L Q A L L Q S P E P N D P Q D A E V A Q H Y L R D R E S F N K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S S
S S S S
S S T T T
S
T T
T S
S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A A L W T R L Y A S E T S N G Q K G N V E E S D L Y G I D H D L I D E F E S Q G F E K D K I V E V L R R L G V K S L D P N D N N T A N R I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S
S S
S
S S
S T
S
S S
S S

. . . . .

Sequence E E L L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	S	R	A	K	R	I	M	K	E	I	Q	A	V	K	D	D	P	A	A	H	I	T	L	E	F	V	S	E	S	D	I	H	H	L	K	G	T	F	L	G	P	P	G	T	P	Y	E	G	G	K	F	V	V	D	I	E	V	P	M	E	Y	P	F	K	P	P	K	M	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T													T	T	T		T	T							S	S	S	S															T	T													S		S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	D	T	K	V	Y	H	P	N	I	S	S	V	T	G	A	I	C	L	D	I	L	R	N	A	W	S	P	V	I	T	L	K	S	A	L	I	S	L	Q	A	L	L	Q	S	P	E	P	N	D	P	Q	D	A	E	V	A	Q	H	Y	L	R	D	R	E	S	F	N	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T				S	S	S		S	S	S	S				S	S	T	T	T			S		T	T															T	S				S	S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	A	L	W	T	R	L	Y	A	S	E	T	S	N	G	Q	K	G	N	V	E	E	S	D	L	Y	G	I	D	H	D	L	I	D	E	F	E	S	Q	G	F	E	K	D	K	I	V	E	V	L	R	R	L	G	V	K	S	L	D	P	N	D	N	N	T	A	N	R	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S				S			S	S				S		S	S					S											T													S			S	S			S	S
	.	.	.	.	.
Sequence	E	E	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T