Fold library entry viewer: c1tk0A_

Added to library: Tue Mar 16 14:09:00 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	V	S	D	I	E	A	N	A	L	L	E	S	V	T	K	F	H	C	G	V	I	Y	D	Y	S	T	A	E	Y	V	S	Y	R	P	S	D	F	G	A	Y	L	D	A	L	E	A	E	V	A	R	G	G	L	I	V	F	H	N	G	H	K	Y	D	V	P	A	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S		G	G	G												T	T	T	T							G	G	G														T	T						S	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	A	K	L	Q	L	N	R	E	F	H	L	P	R	E	N	C	I	D	T	L	V	L	S	R	L	I	H	S	N	L	K	D	T	D	M	G	L	L	R	S	G	K	L	P	G	A	L	E	A	W	G	Y	R	L	G	E	M	K	G	E	Y	K	D	D	F	K	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															G	G	G												T	T	T	S				T	T	T	T	S		G	G	G	S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	E	E	Q	G	E	E	Y	V	D	G	M	E	W	W	N	F	N	E	E	M	M	D	Y	N	V	Q	D	V	V	V	T	K	A	L	L	E	K	L	L	S	D	K	H	Y	F	P	P	E	I	D	F	T	D	V	G	Y	T	T	F	W	S	E	S	L	E	A	V	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S	S					T	T	G	G	G	T	S																									T		T	T	T	S		T	T	S		T	T	S	S									S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	H	R	A	A	W	L	L	A	K	Q	E	R	N	G	F	P	F	D	T	K	A	I	E	E	L	Y	V	E	L	A	A	R	R	S	E	L	L	R	K	L	T	E	T	F	G	S	W	Y	Q	P	K	G	G	T	E	M	F	C	H	P	R	T	G	K	P	L	P	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		B																											S								S			B			B		T	T	T			B		T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	R	I	K	T	P	K	V	G	G	I	F	K	K	P	E	G	R	E	P	C	E	L	D	T	R	E	Y	V	A	G	A	P	Y	T	P	V	E	H	V	V	F	N	P	S	S	R	D	H	I	Q	K	K	L	Q	E	A	G	W	V	P	T	K	Y	T	D	K	G	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	B			S	S			S	B						S	S				B				S			T	T			B										T	T											T	T	T						B		T	T	S		B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	V	D	D	E	V	L	E	G	V	R	V	D	D	P	E	K	Q	A	A	I	D	L	I	K	E	Y	L	M	I	Q	K	R	I	G	Q	S	A	E	G	D	K	A	W	L	R	Y	V	A	E	D	G	K	I	H	G	S	V	N	P	N	G	A	V	T	G	R	A	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										S	S																								T	T	S	T	T						B		T	T	S								T	T		S	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	F	P	N	L	A	Q	I	P	G	V	R	S	P	Y	G	E	Q	C	R	A	A	F	G	A	E	H	H	L	D	G	I	T	G	K	P	W	V	Q	A	G	I	D	A	S	G	L	E	L	R	C	L	A	H	F	M	A	R	F	D	N	G	E	Y	A	H	E	I	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T					T	T	S	T	T							T	B	S	G	G	G		B		T	T	T			B									T	T															T	T						T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	D	I	H	T	K	N	Q	I	A	A	E	L	P	T	R	D	N	A	K	T	F	I	Y	G	F	L	Y	G	A	G	D	E	K	I	G	Q	I	V	G	A	G	K	E	R	G	K	E	L	K	K	K	F	L	E	N	T	P	A	I	A	A	L	R	E	S	I	Q	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T		S														T	T											T	S																	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	V	E	S	S	Q	Q	V	K	W	K	R	R	W	I	K	G	L	D	G	R	K	V	H	V	R	S	P	H	A	A	L	N	T	L	L	Q	S	A	G	A	L	I	C	K	L	W	I	I	K	T	E	E	M	L	V	E	K	G	L	K	H	G	W	D	G	D	F	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S							T	T	S								G	G	G																												T	T			B	S	T	T	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Sequence	M	A	W	V	H	D	E	I	Q	V	G	C	R	T	E	E	I	A	Q	V	V	I	E	T	A	Q	E	A	M	R	W	V	G	D	H	W	N	F	R	C	L	L	D	T	E	G	K	M	G	P	N	W	A	I	C	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S							S	S																						T	T		S	S										S	S	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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