Fold library entry viewer: c1thzA_

Added to library: Tue Mar 16 14:07:38 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	Q	Q	L	A	L	L	S	V	S	E	K	A	G	L	V	E	F	A	R	S	L	N	A	L	G	L	G	L	I	A	S	G	G	T	A	T	A	L	R	D	A	G	L	P	V	R	D	V	S	D	L	T	G	F	P	E	M	L	G	G	R	V	K	T	L	H	P	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S		T	T											T	T																T	T																G	G	G	T	T	T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	A	G	I	L	A	R	N	I	P	E	D	N	A	D	M	N	K	Q	D	F	S	L	V	R	V	V	V	C	N	L	Y	P	F	V	K	T	V	S	S	P	G	V	T	V	P	E	A	V	E	K	I	D	I	G	G	V	A	L	L	R	A	A	A	K	N	H	A	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S											T																				S	T	T									T															T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	V	V	C	D	P	A	D	Y	S	S	V	A	K	E	M	A	A	S	K	D	K	D	T	S	V	E	T	R	R	H	L	A	L	K	A	F	T	H	T	A	Q	Y	D	A	A	I	S	D	Y	F	R	K	E	Y	S	K	G	V	S	Q	L	P	L	R	Y	G	M	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G												T	T	S	S																																		B	T	T	T					S		S	S	S	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	Q	S	P	A	Q	L	Y	T	T	R	P	K	L	P	L	T	V	V	N	G	S	P	G	F	I	N	L	C	D	A	L	N	A	W	Q	L	V	K	E	L	K	Q	A	L	G	I	P	A	A	A	S	F	K	H	V	S	P	A	G	A	A	V	G	I	P	L	S	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S								S	S	S	S		S						S																										S								T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	A	Q	V	C	M	V	H	D	L	H	K	T	L	T	P	L	A	S	A	Y	A	R	S	R	G	A	D	R	M	S	S	F	G	D	F	I	A	L	S	D	I	C	D	V	P	T	A	K	I	I	S	R	E	V	S	D	G	V	V	A	P	G	Y	E	E	E	A	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		G	G	G	G	G	G														S		T	T	T	T	T	T						S	S		B										T	S								S		B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	L	S	K	K	K	N	G	G	Y	C	V	L	Q	M	D	P	N	Y	E	P	D	D	N	E	I	R	T	L	Y	G	L	Q	L	M	Q	K	R	N	N	A	V	I	D	R	S	L	F	K	N	I	V	T	K	N	K	T	L	P	E	S	A	V	R	D	L	I	V	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T					T								T	T					S							T	T													S	G	G	G	G			B		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	A	V	K	Y	T	Q	S	N	S	V	C	Y	A	K	D	G	Q	V	I	G	I	G	A	G	Q	Q	S	R	I	H	C	T	R	L	A	G	D	K	A	N	S	W	W	L	R	H	H	P	R	V	L	S	M	K	F	K	A	G	V	K	R	A	E	V	S	N	A	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S		S	S							T	T								S		S	S																		T	T						T					T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	Y	V	T	G	T	I	G	E	D	E	D	L	V	K	W	Q	A	M	F	E	E	V	P	A	Q	L	T	E	A	E	K	K	Q	W	I	A	K	L	T	A	V	S	L	S	S	D	A	F	F	P	F	R	D	N	V	D	R	A	K	R	I	G	V	Q	F	I	V	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S		S									T	T																		T	T									S	S			S	S	T								T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Sequence	S	G	S	A	A	D	E	V	V	I	E	A	C	N	E	L	G	I	T	L	I	H	T	N	L	R	L	F	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T											T	T							S

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PDB structure

FASTA sequence

Hidden Markov model

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