Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1tdhA_

Fold library idPDB HeaderMoleculeTitle
c1tdhA_PDB header: hydrolaseChain: A: PDB Molecule: nei endonuclease viii-like 1;PDBTitle: crystal structure of human endonuclease viii-like 1 (neil1)


Added to library: Tue Mar 16 12:35:57 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLILSPLPGAQPQQE
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)

TT



SS

S




TT
TT
SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence PLALVFRFGMSGSFQLVPREELPRHAHLRFYTAPPGPRLALCFVDIRRFGRWDLGGKWQPGRGPCVLQEY
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)

TTT
GGG

TTB
SSSS

TT


SS


TT



TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QQFRESVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQPELTLSQKI
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TTTSGGGGSBTT
TTTSTT

T

TTSBGGG


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence RTKLQNPDLLELCHSVPKEVVQLGGRGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTIWFQGDPG
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TTTS

TT
TTSS

SSTT
TT

TTS
SS


 ....
Sequence PLAP
Predicted secondary structure



SS confidence



Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D