Fold library entry viewer: c1tcmB_

Added to library: Tue Mar 16 13:36:01 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	D	T	S	V	S	N	K	Q	N	F	S	T	D	V	I	Y	Q	I	F	T	D	R	F	S	D	G	N	P	A	N	N	P	T	G	A	A	F	D	G	T	C	T	N	L	R	L	Y	C	G	G	D	W	Q	G	I	I	N	K	I	N	D	G	Y	L	T	G	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	T	T		T	T			T	T								T	T	T	T			S		T	T	S				G	G	G	B		S	S			S	T	T	S	B														S	S	T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	T	A	I	W	I	S	Q	P	V	E	N	I	Y	S	I	I	N	Y	S	G	V	N	N	T	A	Y	H	G	Y	W	A	R	D	F	K	K	T	N	P	A	Y	G	T	I	A	D	F	Q	N	L	I	A	A	A	H	A	K	N	I	K	V	I	I	D	F	A	P	N	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T						T	T			S									T	T	T																T	T										S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	S	P	A	S	S	D	Q	P	S	F	A	E	N	G	R	L	Y	D	N	G	T	L	L	G	G	Y	T	N	D	T	Q	N	L	F	H	H	N	G	G	T	D	F	S	T	T	E	N	G	I	Y	K	N	L	Y	D	L	A	D	L	N	H	N	N	S	T	V	D	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B			S	S		T	T	S	T	T	T	T					T	T						S	T	T			S			B			S		B				S	S						S	S	B	B	T	T	B			B		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	K	D	A	I	K	M	W	L	D	L	G	I	D	G	I	R	M	D	A	V	K	H	M	P	F	G	W	Q	K	S	F	M	A	A	V	N	N	Y	K	P	V	F	T	F	G	E	W	F	L	G	V	N	E	V	S	P	E	N	H	K	F	A	N	E	S	G	M	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T							T	T	T	T	S	S														T	T	S												T	T													S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	D	F	R	F	A	Q	K	V	R	Q	V	F	R	D	N	T	D	N	M	Y	G	L	K	A	M	L	E	G	S	A	A	D	Y	A	Q	V	D	D	Q	V	T	F	I	D	N	H	D	M	E	R	F	H	A	S	N	A	N	R	R	K	L	E	Q	A	L	A	F	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B													T	S		S	S																S	T	T	G	G	G	S				S			T	T	S			S	S		T	T	S													T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	S	R	G	V	P	A	I	Y	Y	G	T	E	Q	Y	M	S	G	G	T	D	P	D	N	R	A	R	I	P	S	F	S	T	S	T	T	A	Y	Q	V	I	Q	K	L	A	P	L	R	K	C	N	P	A	I	A	Y	G	S	T	Q	E	R	W	I	N	N	D	V	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S	S			B			T	T	G	G	G	T					S	T	T	T	T	S								S		S										T	T										S										S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	E	R	K	F	G	S	N	V	A	V	V	A	V	N	R	N	L	N	A	P	A	S	I	S	G	L	V	T	S	L	P	Q	G	S	Y	N	D	V	L	G	G	L	L	N	G	N	T	L	S	V	G	S	G	G	A	A	S	N	F	T	L	A	A	G	G	T	A	V	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T											T	T							S		B		S			S						T	T	T	T	S	S	S								T	T	S	B	B							T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	Y	T	A	A	T	A	T	P	T	I	G	H	V	G	P	M	M	A	K	P	G	V	T	I	T	I	D	G	R	G	F	G	S	S	K	G	T	V	Y	F	G	T	T	A	V	S	G	A	D	I	T	S	W	E	D	T	Q	I	K	V	K	I	P	A	V	A	G	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S									S				T	T												S	S							T	T					G	G	G						S	S								S			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	N	I	K	V	A	N	A	A	G	T	A	S	N	V	Y	D	N	F	E	V	L	S	G	D	Q	V	S	V	R	F	V	V	N	N	A	T	T	A	L	G	Q	N	V	Y	L	T	G	S	V	S	E	L	G	N	A	D	P	A	K	A	I	G	P	M	Y	N	Q	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S		B											S	S	S										S					T	T								S	S	T	T	T	T	T	T		T	T	S		B				B		S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Sequence	Y	Q	Y	P	N	W	Y	Y	D	V	S	V	P	A	G	K	T	I	E	F	K	F	L	K	K	Q	G	S	T	V	T	W	E	G	G	S	N	H	T	F	T	A	P	S	S	G	T	A	T	I	N	V	N	W	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S										T	T											S	S	S						S	S	S								S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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