Fold library entry viewer: c1t7qA_

Added to library: Tue Mar 16 13:18:12 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	H	M	A	H	Q	D	A	L	P	R	L	P	V	P	P	L	Q	Q	S	L	D	Y	Y	L	K	A	L	Q	P	I	V	S	E	E	E	W	A	H	T	K	Q	L	V	D	E	F	Q	T	S	G	G	V	G	E	R	L	Q	K	G	L	E	R	R	A	K	K	M	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S																				T	T	T	S																T	S	T	T	S																S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	L	S	E	W	W	L	K	T	A	Y	L	Q	F	R	Q	P	V	V	I	Y	S	S	P	G	V	I	L	P	K	Q	D	F	V	D	L	Q	G	Q	L	R	F	A	A	K	L	I	E	G	V	L	D	F	K	S	M	I	D	N	E	T	L	P	V	E	F	L	G	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S									T	T	T			S		S	B	T	T	T	B												S																								T	T						B	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	L	C	M	N	Q	Y	Y	Q	I	L	S	S	C	R	V	P	G	P	K	Q	D	S	V	V	N	F	L	K	S	K	R	P	P	T	H	I	T	V	V	H	N	Y	Q	F	F	E	L	D	V	Y	H	S	D	G	T	P	L	T	S	D	Q	I	F	V	Q	L	E	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B				G	G	G	G	T	S	S	S							S	S	S							T	T	S	S	S										T	T								B		T	T	S		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	W	N	S	S	L	Q	S	N	K	E	P	V	G	I	L	T	S	N	H	R	N	T	W	A	K	A	Y	N	N	L	I	K	D	K	V	N	R	E	S	V	N	S	I	Q	K	S	I	F	T	V	C	L	D	K	Q	V	P	R	V	S	D	D	V	Y	R	N	H	V	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T					S			G	G	G	G	G	G	S													T	T	S													S	S														T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	M	L	H	G	G	G	S	K	F	N	S	G	N	R	W	F	D	K	T	L	Q	F	I	V	A	E	D	G	S	C	G	M	V	Y	E	H	A	A	A	E	G	P	P	I	V	A	L	V	D	H	V	M	E	Y	T	K	K	P	E	L	V	R	S	P	M	V	P	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		S		T	T	T	T	T	T	S			T	T	B	S							T	T	S								T	T	S																	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	M	P	K	K	L	R	F	N	I	T	P	E	I	K	N	D	I	E	K	A	K	Q	N	L	S	I	M	I	Q	D	L	D	I	M	M	L	T	F	H	H	F	G	K	D	F	P	K	S	E	K	L	S	P	D	A	F	I	Q	V	A	L	Q	L	A	Y	Y	R	I	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																								S			T						T	T																				S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	A	C	A	T	Y	E	S	A	S	L	R	M	F	H	L	G	R	T	D	T	I	R	S	A	S	I	D	S	L	A	F	V	K	G	M	G	D	S	T	V	P	E	Q	Q	K	V	E	L	L	R	K	A	V	Q	A	H	R	A	Y	T	D	R	A	I	R	G	E	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											T	T	S	T	T																					T		T	T	S																									T	T			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	R	H	L	L	G	L	K	L	Q	A	I	E	D	L	V	S	M	P	D	I	F	M	D	T	S	Y	A	I	A	M	H	F	N	L	S	T	S	Q	V	P	A	K	T	D	C	V	M	A	F	G	P	V	V	P	D	G	Y	G	I	C	Y	N	P	M	E	A	H	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T									S							T			S									S	S	S								S	S	T	T										S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Sequence	F	S	V	S	A	Y	N	S	C	A	E	T	N	A	A	R	M	A	H	Y	L	E	K	A	L	L	D	M	R	T	L	L	Q	N	H	P	R	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		T	T																							T	S		S

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PDB structure

FASTA sequence

Hidden Markov model

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