Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1t3nB_

Fold library idPDB HeaderMoleculeTitle
c1t3nB_PDB header: replication/dnaChain: B: PDB Molecule: polymerase (dna directed) iota;PDBTitle: structure of the catalytic core of dna polymerase iota in2 complex with dna and dttp


Added to library: Tue Mar 16 13:16:30 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNG
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)


TTT
GGGTTS
TT
SSSS

TT

GGGGGSSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence EDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLL
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)



S
TTT
TS
SSGGGG



STTS



TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHI
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)



SSTSSTTT


GGGTT
SSG
 .........220.........230.........240.........250.........260.........270.........280
Sequence KEIPGIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEED
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) GGSTT

TT

SS

TT









S
S

B


 .........290.........300.........310.........320.........330.........340.........350
Sequence SFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGN
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)

TT


SSS
TS



S






SS




B






TTTSS
 .........360.........370.........380........
Sequence YDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK
Predicted secondary structure













SS confidence





































Known secondary structure (DSSP)
TTTTT
S
SSS







B

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D