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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1s97D_

Fold library idPDB HeaderMoleculeTitle
c1s97D_PDB header: transferase/dnaChain: D: PDB Molecule: dna polymerase iv;PDBTitle: dpo4 with gt mismatch


Added to library: Tue Mar 16 12:38:17 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPN
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Known secondary structure (DSSP)

TTS
GGGTTS

SSSTT

TT

TTSB
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITV
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Known secondary structure (DSSP) S

TTT
S
TT
TTT
SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence TVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEF
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Known secondary structure (DSSP) SS
SS

S
TTSSTT

TTT

STTTTTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRI
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Known secondary structure (DSSP) TT













TT

 .........290.........300.........310.........320.........330.........340.
Sequence PKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI
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Known secondary structure (DSSP) TTS

SS


S

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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