PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1s7cA_

Fold library id	PDB Header	Molecule	Title
c1s7cA_	PDB header: structural genomics, oxidoreductase	Chain: A: PDB Molecule: glyceraldehyde 3-phosphate dehydrogenase a;	PDBTitle: crystal structure of mes buffer bound form of2 glyceraldehyde 3-phosphate dehydrogenase from escherichia3 coli

Links to external resources
Added to library: Tue Mar 16 13:47:09 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T I K V G I N G F G R I G R I V F R A A Q K R S D I E I V A I N D L L D A D Y M A Y M L K Y D S T H G R F D G T V E V K D G H L I V N G K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S S S S S
T T T
S
S S
S S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I R V T A E R D P A N L K W D E V G V D V V A E A T G L F L T D E T A R K H I T A G A K K V V M T G P S K D N T P M F V K G A N F D K Y A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G
G G G G T
S
S S S
S T T
S S S
S S S
B
T T T T G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q D I V S N A S C T T N C L A P L A K V I N D N F G I I E G L M T T V H A T T A T Q K T V D G P S H K D W R G G R G A S Q N I I P S S T G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
S S S
T T
S G G G S
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A K A V G K V L P E L N G K L T G M A F R V P T P N V S V V D L T V R L E K A A T Y E Q I K A A V K A A A E G E M K G V L G Y T E D D V V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G T T S S
S S
S S
T T T T T T
S
G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330

Sequence T D F N G E V C T S V F D A K A G I A L N D N F V K L V S W Y D N E T G Y S N K V L D L I A H I S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T
S S T T T
T T
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	I	K	V	G	I	N	G	F	G	R	I	G	R	I	V	F	R	A	A	Q	K	R	S	D	I	E	I	V	A	I	N	D	L	L	D	A	D	Y	M	A	Y	M	L	K	Y	D	S	T	H	G	R	F	D	G	T	V	E	V	K	D	G	H	L	I	V	N	G	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S											T	T		S	S								S	S	S													T	T	T		S		S	S					S	S	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	R	V	T	A	E	R	D	P	A	N	L	K	W	D	E	V	G	V	D	V	V	A	E	A	T	G	L	F	L	T	D	E	T	A	R	K	H	I	T	A	G	A	K	K	V	V	M	T	G	P	S	K	D	N	T	P	M	F	V	K	G	A	N	F	D	K	Y	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	G	G	G			G	G	G	G	T		S						S	S	S			S										T	T		S					S	S			S	S	S			B			T	T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	D	I	V	S	N	A	S	C	T	T	N	C	L	A	P	L	A	K	V	I	N	D	N	F	G	I	I	E	G	L	M	T	T	V	H	A	T	T	A	T	Q	K	T	V	D	G	P	S	H	K	D	W	R	G	G	R	G	A	S	Q	N	I	I	P	S	S	T	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																																						T	T	S		S	S	S				T	T		S	G	G	G	S		T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	K	A	V	G	K	V	L	P	E	L	N	G	K	L	T	G	M	A	F	R	V	P	T	P	N	V	S	V	V	D	L	T	V	R	L	E	K	A	A	T	Y	E	Q	I	K	A	A	V	K	A	A	A	E	G	E	M	K	G	V	L	G	Y	T	E	D	D	V	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	G	G	G	T	T	S									S		S	S											S	S																	T	T	T	T	T	T						S				G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Sequence	T	D	F	N	G	E	V	C	T	S	V	F	D	A	K	A	G	I	A	L	N	D	N	F	V	K	L	V	S	W	Y	D	N	E	T	G	Y	S	N	K	V	L	D	L	I	A	H	I	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	T	T			S	S					T	T	T						T	T										T	T															T